Gene : Glyma.04G042700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10880 - MORTALITY FACTOR 4-LIKE PROTEIN Genomic Order:  427
Name:  ? Glyma.04G042700 Secondary Identifier:  ? PAC:30488293
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G042700 0.5kb upstream 0.5kb upstream 4826 true Chr04: 3445224-3450049 Glycine max
Glyma.04G042700 0.5kb upstream 0.5kb upstream 500 false Chr04: 3449550-3450049 Glycine max
Glyma.04G042700 0.5kb downstream 0.5kb downstream 4826 true Chr04: 3444724-3449549 Glycine max
Glyma.04G042700 0.5kb downstream 0.5kb downstream 500 false Chr04: 3444724-3445223 Glycine max
Glyma.04G042700 1.0kb upstream 1.0kb upstream 5326 true Chr04: 3445224-3450549 Glycine max
Glyma.04G042700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3449550-3450549 Glycine max
Glyma.04G042700 1.0kb downstream 1.0kb downstream 5326 true Chr04: 3444224-3449549 Glycine max
Glyma.04G042700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3444224-3445223 Glycine max
Glyma.04G042700 2.0kb upstream 2.0kb upstream 6326 true Chr04: 3445224-3451549 Glycine max
Glyma.04G042700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3449550-3451549 Glycine max
Glyma.04G042700 2.0kb downstream 2.0kb downstream 6326 true Chr04: 3443224-3449549 Glycine max
Glyma.04G042700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3443224-3445223 Glycine max
Glyma.04G042700 5.0kb upstream 5.0kb upstream 9326 true Chr04: 3445224-3454549 Glycine max
Glyma.04G042700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3449550-3454549 Glycine max
Glyma.04G042700 5.0kb downstream 5.0kb downstream 9326 true Chr04: 3440224-3449549 Glycine max
Glyma.04G042700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3440224-3445223 Glycine max
Glyma.04G042700 10.0kb upstream 10.0kb upstream 14326 true Chr04: 3445224-3459549 Glycine max
Glyma.04G042700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3449550-3459549 Glycine max
Glyma.04G042700 10.0kb downstream 10.0kb downstream 14326 true Chr04: 3435224-3449549 Glycine max
Glyma.04G042700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3435224-3445223 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312042 5265 Fabidae View MSA
124068001 5270 Rosid View MSA
123739496 5271 Pentapetalae View MSA
122785751 5272 Eudicot View MSA
122043270 5273 Angiosperm View MSA
121343861 5274 Embryophyte View MSA
123424392 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.04616 0.0 27.1701    
cufflinks 11.5204 0.0 48.7344   High
cufflinks 6.34814 0.0 28.3272    
cufflinks 8.25585 0.0 37.7808    
cufflinks 6.38098 0.0 27.8161    
cufflinks 7.35257 0.0 29.7745    
cufflinks 6.25634 0.0 27.5957    
cufflinks 6.50774 0.0 27.3699    
cufflinks 11.2245 0.0 46.9279   High
cufflinks 0.584        
cufflinks 0.244       Low
cufflinks 1.112        
cufflinks 0.781        
cufflinks 0.689        
cufflinks 0.441        
cufflinks 0.965        
cufflinks 0.679        
cufflinks 1.259       High
cufflinks 1.446       High
cufflinks 0.76        
cufflinks 0.368       Low
cufflinks 0.954        
cufflinks 1.174       High
cufflinks 0.363       Low
cufflinks 0.817        
cufflinks 0.468        

0 Strain