Gene : Glyma.04G042400 G. max Wm82.a2.v1
Defline:  (1 of 25) PF00069//PF00954//PF01453 - Protein kinase domain (Pkinase) // S-locus glycoprotein domain (S_locus_glycop) // D-mannose binding lectin (B_lectin) Genomic Order:  424
Name:  ? Glyma.04G042400 Secondary Identifier:  ? PAC:30489452
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G042400 0.5kb upstream 0.5kb upstream 3301 true Chr04: 3423048-3426348 Glycine max
Glyma.04G042400 0.5kb upstream 0.5kb upstream 500 false Chr04: 3423048-3423547 Glycine max
Glyma.04G042400 0.5kb downstream 0.5kb downstream 3301 true Chr04: 3423548-3426848 Glycine max
Glyma.04G042400 0.5kb downstream 0.5kb downstream 500 false Chr04: 3426349-3426848 Glycine max
Glyma.04G042400 1.0kb upstream 1.0kb upstream 3801 true Chr04: 3422548-3426348 Glycine max
Glyma.04G042400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3422548-3423547 Glycine max
Glyma.04G042400 1.0kb downstream 1.0kb downstream 3801 true Chr04: 3423548-3427348 Glycine max
Glyma.04G042400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3426349-3427348 Glycine max
Glyma.04G042400 2.0kb upstream 2.0kb upstream 4801 true Chr04: 3421548-3426348 Glycine max
Glyma.04G042400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3421548-3423547 Glycine max
Glyma.04G042400 2.0kb downstream 2.0kb downstream 4801 true Chr04: 3423548-3428348 Glycine max
Glyma.04G042400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3426349-3428348 Glycine max
Glyma.04G042400 5.0kb upstream 5.0kb upstream 7801 true Chr04: 3418548-3426348 Glycine max
Glyma.04G042400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3418548-3423547 Glycine max
Glyma.04G042400 5.0kb downstream 5.0kb downstream 7801 true Chr04: 3423548-3431348 Glycine max
Glyma.04G042400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3426349-3431348 Glycine max
Glyma.04G042400 10.0kb upstream 10.0kb upstream 12801 true Chr04: 3413548-3426348 Glycine max
Glyma.04G042400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3413548-3423547 Glycine max
Glyma.04G042400 10.0kb downstream 10.0kb downstream 12801 true Chr04: 3423548-3436348 Glycine max
Glyma.04G042400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3426349-3436348 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048151 5273 Angiosperm View MSA
122296655 5265 Fabidae View MSA
124071977 5270 Rosid View MSA
123751371 5271 Pentapetalae View MSA
122773994 5272 Eudicot View MSA
121310866 5274 Embryophyte View MSA
123348250 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 56.1866 0.0 172.63 High High
cufflinks 0.0075792 0.0 0.0343718 Low Low
cufflinks 0.320426 0.0 1.18439    
cufflinks 0.00843036 0.0 0.037829 Low Low
cufflinks 16.4615 0.0 44.2806    
cufflinks 8.6575 0.0 23.1746    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.429109 0.0 1.55818    
cufflinks 26.0367 0.0 72.1853 High  
cufflinks 0.005     Low Low
cufflinks 71.881     High High
cufflinks 0.246        
cufflinks 12.395     High  
cufflinks 1.885        
cufflinks 26.762     High  
cufflinks 0.397        
cufflinks 36.951     High  
cufflinks 0.121        
cufflinks 0.017     Low Low
cufflinks 0.48        
cufflinks 97.106     High High
cufflinks 0.245        
cufflinks 0.025     Low Low
cufflinks 149.922     High High
cufflinks 0.767        
cufflinks 98.791     High High

0 Strain