Gene : Glyma.04G040200 G. max Wm82.a2.v1
Defline:  (1 of 152) PF02458 - Transferase family (Transferase) Genomic Order:  402
Name:  ? Glyma.04G040200 Secondary Identifier:  ? PAC:30490200
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-361 Glycine max pathologic  
Gmax PWY-6040 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G040200 0.5kb upstream 0.5kb upstream 2879 true Chr04: 3220360-3223238 Glycine max
Glyma.04G040200 0.5kb upstream 0.5kb upstream 500 false Chr04: 3222739-3223238 Glycine max
Glyma.04G040200 0.5kb downstream 0.5kb downstream 2879 true Chr04: 3219860-3222738 Glycine max
Glyma.04G040200 0.5kb downstream 0.5kb downstream 500 false Chr04: 3219860-3220359 Glycine max
Glyma.04G040200 1.0kb upstream 1.0kb upstream 3379 true Chr04: 3220360-3223738 Glycine max
Glyma.04G040200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3222739-3223738 Glycine max
Glyma.04G040200 1.0kb downstream 1.0kb downstream 3379 true Chr04: 3219360-3222738 Glycine max
Glyma.04G040200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3219360-3220359 Glycine max
Glyma.04G040200 2.0kb upstream 2.0kb upstream 4379 true Chr04: 3220360-3224738 Glycine max
Glyma.04G040200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3222739-3224738 Glycine max
Glyma.04G040200 2.0kb downstream 2.0kb downstream 4379 true Chr04: 3218360-3222738 Glycine max
Glyma.04G040200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3218360-3220359 Glycine max
Glyma.04G040200 5.0kb upstream 5.0kb upstream 7379 true Chr04: 3220360-3227738 Glycine max
Glyma.04G040200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3222739-3227738 Glycine max
Glyma.04G040200 5.0kb downstream 5.0kb downstream 7379 true Chr04: 3215360-3222738 Glycine max
Glyma.04G040200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3215360-3220359 Glycine max
Glyma.04G040200 10.0kb upstream 10.0kb upstream 12379 true Chr04: 3220360-3232738 Glycine max
Glyma.04G040200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3222739-3232738 Glycine max
Glyma.04G040200 10.0kb downstream 10.0kb downstream 12379 true Chr04: 3210360-3222738 Glycine max
Glyma.04G040200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3210360-3220359 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300600 5265 Fabidae View MSA
124068484 5270 Rosid View MSA
123747860 5271 Pentapetalae View MSA
122791254 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.04297 0.0 23.9708    
cufflinks 0.634808 0.0 2.86918    
cufflinks 1.33299 0.0 4.93252    
cufflinks 0.146802 0.0 0.650502 Low Low
cufflinks 8.31598 0.0 24.999    
cufflinks 10.2109 0.0 34.0613   High
cufflinks 0.927842 0.0 3.95321    
cufflinks 0.40371 0.0 1.71133    
cufflinks 8.38876 0.0 25.3345    
cufflinks 1.651        
cufflinks 33.895     High High
cufflinks 0.788        
cufflinks 7.609     High  
cufflinks 3.386        
cufflinks 39.947     High High
cufflinks 0.517        
cufflinks 5.089        
cufflinks 1.277        
cufflinks 0.984        
cufflinks 0.137       Low
cufflinks 37.397     High High
cufflinks 0.638        
cufflinks 0.806        
cufflinks 25.393     High High
cufflinks 0.174       Low
cufflinks 30.554     High High

0 Strain