Gene : Glyma.04G050400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11108:SF4 - FERROCHELATASE-1, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  504
Name:  ? Glyma.04G050400 Secondary Identifier:  ? PAC:30491161
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax HEME-BIOSYNTHESIS-II Glycine max pathologic  
Gmax PWY-5918 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G050400 0.5kb upstream 0.5kb upstream 4006 true Chr04: 4100775-4104780 Glycine max
Glyma.04G050400 0.5kb upstream 0.5kb upstream 500 false Chr04: 4100775-4101274 Glycine max
Glyma.04G050400 0.5kb downstream 0.5kb downstream 4006 true Chr04: 4101275-4105280 Glycine max
Glyma.04G050400 0.5kb downstream 0.5kb downstream 500 false Chr04: 4104781-4105280 Glycine max
Glyma.04G050400 1.0kb upstream 1.0kb upstream 4506 true Chr04: 4100275-4104780 Glycine max
Glyma.04G050400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4100275-4101274 Glycine max
Glyma.04G050400 1.0kb downstream 1.0kb downstream 4506 true Chr04: 4101275-4105780 Glycine max
Glyma.04G050400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4104781-4105780 Glycine max
Glyma.04G050400 2.0kb upstream 2.0kb upstream 5506 true Chr04: 4099275-4104780 Glycine max
Glyma.04G050400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4099275-4101274 Glycine max
Glyma.04G050400 2.0kb downstream 2.0kb downstream 5506 true Chr04: 4101275-4106780 Glycine max
Glyma.04G050400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4104781-4106780 Glycine max
Glyma.04G050400 5.0kb upstream 5.0kb upstream 8506 true Chr04: 4096275-4104780 Glycine max
Glyma.04G050400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4096275-4101274 Glycine max
Glyma.04G050400 5.0kb downstream 5.0kb downstream 8506 true Chr04: 4101275-4109780 Glycine max
Glyma.04G050400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4104781-4109780 Glycine max
Glyma.04G050400 10.0kb upstream 10.0kb upstream 13506 true Chr04: 4091275-4104780 Glycine max
Glyma.04G050400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4091275-4101274 Glycine max
Glyma.04G050400 10.0kb downstream 10.0kb downstream 13506 true Chr04: 4101275-4114780 Glycine max
Glyma.04G050400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4104781-4114780 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305462 5265 Fabidae View MSA
124062262 5270 Rosid View MSA
123738607 5271 Pentapetalae View MSA
122786704 5272 Eudicot View MSA
122047545 5273 Angiosperm View MSA
121310756 5274 Embryophyte View MSA
123426598 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 67.8449 0.0 240.503 High High
cufflinks 9.43139 0.0 33.8362    
cufflinks 139.61 0.0 661.962 High High
cufflinks 8.31026 0.0 30.4809    
cufflinks 16.5401 0.0 55.6219    
cufflinks 42.399 0.0 154.993 High  
cufflinks 8.45054 0.0 31.181    
cufflinks 10.7776 0.0 38.5931    
cufflinks 20.0309 0.0 67.2142 High  
cufflinks 6.768        
cufflinks 45.902     High High
cufflinks 18.289     High  
cufflinks 11.914     High  
cufflinks 4.497        
cufflinks 28.737     High  
cufflinks 3.699        
cufflinks 54.746     High High
cufflinks 3.968        
cufflinks 3.981        
cufflinks 2.552       Low
cufflinks 46.473     High High
cufflinks 4.252        
cufflinks 2.985       Low
cufflinks 40.601     High High
cufflinks 3.427        
cufflinks 38.775     High High

0 Strain