Gene : Glyma.04G047900 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  479
Name:  ? Glyma.04G047900 Secondary Identifier:  ? PAC:30489389
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G047900 0.5kb upstream 0.5kb upstream 4797 true Chr04: 3857552-3862348 Glycine max
Glyma.04G047900 0.5kb upstream 0.5kb upstream 500 false Chr04: 3857552-3858051 Glycine max
Glyma.04G047900 0.5kb downstream 0.5kb downstream 4797 true Chr04: 3858052-3862848 Glycine max
Glyma.04G047900 0.5kb downstream 0.5kb downstream 500 false Chr04: 3862349-3862848 Glycine max
Glyma.04G047900 1.0kb upstream 1.0kb upstream 5297 true Chr04: 3857052-3862348 Glycine max
Glyma.04G047900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3857052-3858051 Glycine max
Glyma.04G047900 1.0kb downstream 1.0kb downstream 5297 true Chr04: 3858052-3863348 Glycine max
Glyma.04G047900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3862349-3863348 Glycine max
Glyma.04G047900 2.0kb upstream 2.0kb upstream 6297 true Chr04: 3856052-3862348 Glycine max
Glyma.04G047900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3856052-3858051 Glycine max
Glyma.04G047900 2.0kb downstream 2.0kb downstream 6297 true Chr04: 3858052-3864348 Glycine max
Glyma.04G047900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3862349-3864348 Glycine max
Glyma.04G047900 5.0kb upstream 5.0kb upstream 9297 true Chr04: 3853052-3862348 Glycine max
Glyma.04G047900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3853052-3858051 Glycine max
Glyma.04G047900 5.0kb downstream 5.0kb downstream 9297 true Chr04: 3858052-3867348 Glycine max
Glyma.04G047900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3862349-3867348 Glycine max
Glyma.04G047900 10.0kb upstream 10.0kb upstream 14297 true Chr04: 3848052-3862348 Glycine max
Glyma.04G047900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3848052-3858051 Glycine max
Glyma.04G047900 10.0kb downstream 10.0kb downstream 14297 true Chr04: 3858052-3872348 Glycine max
Glyma.04G047900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3862349-3872348 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300220 5265 Fabidae View MSA
124069509 5270 Rosid View MSA
123749531 5271 Pentapetalae View MSA
122794764 5272 Eudicot View MSA
122048323 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121349804 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.291949 0.0 1.07446   Low
cufflinks 21.1422 0.0 58.2286 High High
cufflinks 1.15869 0.0 3.76588    
cufflinks 0.6312 0.0 2.20136    
cufflinks 1.88474 0.0 5.73639    
cufflinks 1.09451 0.0 3.59567    
cufflinks 0.620246 0.0 2.1701    
cufflinks 11.4715 0.0 30.6503   High
cufflinks 2.69876 0.0 7.82484    
cufflinks 1.53        
cufflinks 0.189       Low
cufflinks 3.565        
cufflinks 0.738        
cufflinks 0.102       Low
cufflinks 0.948        
cufflinks 11.871     High High
cufflinks 2.75        
cufflinks 1.872        
cufflinks 18.955     High High
cufflinks 6.455        
cufflinks 0.299       Low
cufflinks 6.899        
cufflinks 9.334     High High
cufflinks 0.11       Low
cufflinks 8.617     High  
cufflinks 0.904        

0 Strain