Gene : Glyma.19G152800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR16019:SF7 - BSD DOMAIN-CONTAINING PROTEIN Genomic Order:  1529
Name:  ? Glyma.19G152800 Secondary Identifier:  ? PAC:30511659
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G152800 0.5kb upstream 0.5kb upstream 1647 true Chr19: 41308723-41310369 Glycine max
Glyma.19G152800 0.5kb upstream 0.5kb upstream 500 false Chr19: 41308723-41309222 Glycine max
Glyma.19G152800 0.5kb downstream 0.5kb downstream 1647 true Chr19: 41309223-41310869 Glycine max
Glyma.19G152800 0.5kb downstream 0.5kb downstream 500 false Chr19: 41310370-41310869 Glycine max
Glyma.19G152800 1.0kb upstream 1.0kb upstream 2147 true Chr19: 41308223-41310369 Glycine max
Glyma.19G152800 1.0kb upstream 1.0kb upstream 1000 false Chr19: 41308223-41309222 Glycine max
Glyma.19G152800 1.0kb downstream 1.0kb downstream 2147 true Chr19: 41309223-41311369 Glycine max
Glyma.19G152800 1.0kb downstream 1.0kb downstream 1000 false Chr19: 41310370-41311369 Glycine max
Glyma.19G152800 2.0kb upstream 2.0kb upstream 3147 true Chr19: 41307223-41310369 Glycine max
Glyma.19G152800 2.0kb upstream 2.0kb upstream 2000 false Chr19: 41307223-41309222 Glycine max
Glyma.19G152800 2.0kb downstream 2.0kb downstream 3147 true Chr19: 41309223-41312369 Glycine max
Glyma.19G152800 2.0kb downstream 2.0kb downstream 2000 false Chr19: 41310370-41312369 Glycine max
Glyma.19G152800 5.0kb upstream 5.0kb upstream 6147 true Chr19: 41304223-41310369 Glycine max
Glyma.19G152800 5.0kb upstream 5.0kb upstream 5000 false Chr19: 41304223-41309222 Glycine max
Glyma.19G152800 5.0kb downstream 5.0kb downstream 6147 true Chr19: 41309223-41315369 Glycine max
Glyma.19G152800 5.0kb downstream 5.0kb downstream 5000 false Chr19: 41310370-41315369 Glycine max
Glyma.19G152800 10.0kb upstream 10.0kb upstream 11147 true Chr19: 41299223-41310369 Glycine max
Glyma.19G152800 10.0kb upstream 10.0kb upstream 10000 false Chr19: 41299223-41309222 Glycine max
Glyma.19G152800 10.0kb downstream 10.0kb downstream 11147 true Chr19: 41309223-41320369 Glycine max
Glyma.19G152800 10.0kb downstream 10.0kb downstream 10000 false Chr19: 41310370-41320369 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297942 5265 Fabidae View MSA
124071131 5270 Rosid View MSA
123740161 5271 Pentapetalae View MSA
122791095 5272 Eudicot View MSA
122047719 5273 Angiosperm View MSA
121347355 5274 Embryophyte View MSA
123428249 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0643206 0.0 1.59453 Low  
cufflinks 0.0157536 0.0 0.600304 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0780462 0.0 1.32283 Low  
cufflinks 0.0270314 0.0 1.00107 Low Low
cufflinks 0.0919191 0.0 1.16935 Low  
cufflinks 0.0980982 0.0 1.2146 Low  
cufflinks 0.0638633 0.0 1.70115 Low  
cufflinks 0.193712 0.0 2.63379 Low High
cufflinks 0.081     Low  
cufflinks 0.095        
cufflinks 0.084     Low  
cufflinks 0.073     Low  
cufflinks 0.053     Low  
cufflinks 0.162       High
cufflinks 0.029     Low Low
cufflinks 0.147       High
cufflinks 0.118        
cufflinks 0.077     Low  
cufflinks 0.064     Low  
cufflinks 0.083        
cufflinks 0.073     Low  
cufflinks 0.046     Low  
cufflinks 0.15       High
cufflinks 0.038     Low  
cufflinks 0.012     Low Low

0 Strain