Gene : Glyma.04G052200 G. max Wm82.a2.v1
Defline:  (1 of 111) PF00612 - IQ calmodulin-binding motif (IQ) Genomic Order:  522
Name:  ? Glyma.04G052200 Secondary Identifier:  ? PAC:30489082
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G052200 0.5kb upstream 0.5kb upstream 3022 true Chr04: 4237046-4240067 Glycine max
Glyma.04G052200 0.5kb upstream 0.5kb upstream 500 false Chr04: 4239568-4240067 Glycine max
Glyma.04G052200 0.5kb downstream 0.5kb downstream 3022 true Chr04: 4236546-4239567 Glycine max
Glyma.04G052200 0.5kb downstream 0.5kb downstream 500 false Chr04: 4236546-4237045 Glycine max
Glyma.04G052200 1.0kb upstream 1.0kb upstream 3522 true Chr04: 4237046-4240567 Glycine max
Glyma.04G052200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4239568-4240567 Glycine max
Glyma.04G052200 1.0kb downstream 1.0kb downstream 3522 true Chr04: 4236046-4239567 Glycine max
Glyma.04G052200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4236046-4237045 Glycine max
Glyma.04G052200 2.0kb upstream 2.0kb upstream 4522 true Chr04: 4237046-4241567 Glycine max
Glyma.04G052200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4239568-4241567 Glycine max
Glyma.04G052200 2.0kb downstream 2.0kb downstream 4522 true Chr04: 4235046-4239567 Glycine max
Glyma.04G052200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4235046-4237045 Glycine max
Glyma.04G052200 5.0kb upstream 5.0kb upstream 7522 true Chr04: 4237046-4244567 Glycine max
Glyma.04G052200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4239568-4244567 Glycine max
Glyma.04G052200 5.0kb downstream 5.0kb downstream 7522 true Chr04: 4232046-4239567 Glycine max
Glyma.04G052200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4232046-4237045 Glycine max
Glyma.04G052200 10.0kb upstream 10.0kb upstream 12522 true Chr04: 4237046-4249567 Glycine max
Glyma.04G052200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4239568-4249567 Glycine max
Glyma.04G052200 10.0kb downstream 10.0kb downstream 12522 true Chr04: 4227046-4239567 Glycine max
Glyma.04G052200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4227046-4237045 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041133 5273 Angiosperm View MSA
122306621 5265 Fabidae View MSA
124066081 5270 Rosid View MSA
123748663 5271 Pentapetalae View MSA
122789364 5272 Eudicot View MSA
121351537 5274 Embryophyte View MSA
123382213 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.173513 0.0 0.665685 Low Low
cufflinks 11.9193 0.0 31.8467   High
cufflinks 0.642203 0.0 2.29989    
cufflinks 3.38431 0.0 9.96306    
cufflinks 2.83513 0.0 8.57053    
cufflinks 1.59322 0.0 5.2326    
cufflinks 5.02735 0.0 14.1324    
cufflinks 1.68238 0.0 5.45681    
cufflinks 8.93572 0.0 24.0841   High
cufflinks 1.242       Low
cufflinks 7.55     High  
cufflinks 1.827       Low
cufflinks 3.147        
cufflinks 2.466        
cufflinks 16.14     High High
cufflinks 8.216     High  
cufflinks 1.762       Low
cufflinks 1.182       Low
cufflinks 19.051     High High
cufflinks 4.741        
cufflinks 6.55     High  
cufflinks 7.809     High  
cufflinks 9.84     High  
cufflinks 3.167        
cufflinks 5.596        
cufflinks 2.469        

0 Strain