Gene : Glyma.04G050600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11995:SF19 - NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 7, MITOCHONDRIAL Genomic Order:  506
Name:  ? Glyma.04G050600 Secondary Identifier:  ? PAC:30489159
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-3781 Glycine max pathologic  
Gmax PWY-4302 Glycine max pathologic  
Gmax PWY-5083 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G050600 0.5kb upstream 0.5kb upstream 3278 true Chr04: 4111460-4114737 Glycine max
Glyma.04G050600 0.5kb upstream 0.5kb upstream 500 false Chr04: 4114238-4114737 Glycine max
Glyma.04G050600 0.5kb downstream 0.5kb downstream 3278 true Chr04: 4110960-4114237 Glycine max
Glyma.04G050600 0.5kb downstream 0.5kb downstream 500 false Chr04: 4110960-4111459 Glycine max
Glyma.04G050600 1.0kb upstream 1.0kb upstream 3778 true Chr04: 4111460-4115237 Glycine max
Glyma.04G050600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4114238-4115237 Glycine max
Glyma.04G050600 1.0kb downstream 1.0kb downstream 3778 true Chr04: 4110460-4114237 Glycine max
Glyma.04G050600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4110460-4111459 Glycine max
Glyma.04G050600 2.0kb upstream 2.0kb upstream 4778 true Chr04: 4111460-4116237 Glycine max
Glyma.04G050600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4114238-4116237 Glycine max
Glyma.04G050600 2.0kb downstream 2.0kb downstream 4778 true Chr04: 4109460-4114237 Glycine max
Glyma.04G050600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4109460-4111459 Glycine max
Glyma.04G050600 5.0kb upstream 5.0kb upstream 7778 true Chr04: 4111460-4119237 Glycine max
Glyma.04G050600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4114238-4119237 Glycine max
Glyma.04G050600 5.0kb downstream 5.0kb downstream 7778 true Chr04: 4106460-4114237 Glycine max
Glyma.04G050600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4106460-4111459 Glycine max
Glyma.04G050600 10.0kb upstream 10.0kb upstream 12778 true Chr04: 4111460-4124237 Glycine max
Glyma.04G050600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4114238-4124237 Glycine max
Glyma.04G050600 10.0kb downstream 10.0kb downstream 12778 true Chr04: 4101460-4114237 Glycine max
Glyma.04G050600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4101460-4111459 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041386 5273 Angiosperm View MSA
122308048 5265 Fabidae View MSA
124062804 5270 Rosid View MSA
123752382 5271 Pentapetalae View MSA
122791992 5272 Eudicot View MSA
121350151 5274 Embryophyte View MSA
123428091 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.053 0.0 118.078 High  
cufflinks 41.4642 0.0 110.919 High  
cufflinks 33.0755 0.0 88.2447 High Low
cufflinks 48.6476 0.0 130.753 High  
cufflinks 66.452 0.0 182.55 High High
cufflinks 40.2831 0.0 107.744 High  
cufflinks 69.2608 0.0 190.622 High High
cufflinks 51.5135 0.0 138.871 High  
cufflinks 41.7273 0.0 111.716 High  
cufflinks 14.125     High High
cufflinks 5.448       Low
cufflinks 8.377     High  
cufflinks 15.903     High High
cufflinks 18.67     High High
cufflinks 5.409     High Low
cufflinks 9.035     High  
cufflinks 8.274     High  
cufflinks 10.418     High  
cufflinks 12.39     High  
cufflinks 7.939     High  
cufflinks 6.623     High  
cufflinks 8.667     High  
cufflinks 8.39     High  
cufflinks 7.469     High  
cufflinks 7.655     High  
cufflinks 7.505     High  

0 Strain