Gene : Glyma.04G055600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11748:SF17 - CYTOKININ DEHYDROGENASE 2-RELATED Genomic Order:  556
Name:  ? Glyma.04G055600 Secondary Identifier:  ? PAC:30487130
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G055600 0.5kb upstream 0.5kb upstream 4575 true Chr04: 4492366-4496940 Glycine max
Glyma.04G055600 0.5kb upstream 0.5kb upstream 500 false Chr04: 4492366-4492865 Glycine max
Glyma.04G055600 0.5kb downstream 0.5kb downstream 4575 true Chr04: 4492866-4497440 Glycine max
Glyma.04G055600 0.5kb downstream 0.5kb downstream 500 false Chr04: 4496941-4497440 Glycine max
Glyma.04G055600 1.0kb upstream 1.0kb upstream 5075 true Chr04: 4491866-4496940 Glycine max
Glyma.04G055600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4491866-4492865 Glycine max
Glyma.04G055600 1.0kb downstream 1.0kb downstream 5075 true Chr04: 4492866-4497940 Glycine max
Glyma.04G055600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4496941-4497940 Glycine max
Glyma.04G055600 2.0kb upstream 2.0kb upstream 6075 true Chr04: 4490866-4496940 Glycine max
Glyma.04G055600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4490866-4492865 Glycine max
Glyma.04G055600 2.0kb downstream 2.0kb downstream 6075 true Chr04: 4492866-4498940 Glycine max
Glyma.04G055600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4496941-4498940 Glycine max
Glyma.04G055600 5.0kb upstream 5.0kb upstream 9075 true Chr04: 4487866-4496940 Glycine max
Glyma.04G055600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4487866-4492865 Glycine max
Glyma.04G055600 5.0kb downstream 5.0kb downstream 9075 true Chr04: 4492866-4501940 Glycine max
Glyma.04G055600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4496941-4501940 Glycine max
Glyma.04G055600 10.0kb upstream 10.0kb upstream 14075 true Chr04: 4482866-4496940 Glycine max
Glyma.04G055600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4482866-4492865 Glycine max
Glyma.04G055600 10.0kb downstream 10.0kb downstream 14075 true Chr04: 4492866-4506940 Glycine max
Glyma.04G055600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4496941-4506940 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309624 5265 Fabidae View MSA
124065015 5270 Rosid View MSA
123739004 5271 Pentapetalae View MSA
122769941 5272 Eudicot View MSA
122041692 5273 Angiosperm View MSA
121309881 5274 Embryophyte View MSA
123347519 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.8362 0.0 23.05   High
cufflinks 0.132508 0.0 0.514702 Low Low
cufflinks 0.226051 0.0 1.07016    
cufflinks 1.57399 0.0 8.21441    
cufflinks 0.22672 0.0 1.13467 Low  
cufflinks 0.0878625 0.0 0.346769 Low Low
cufflinks 0.761589 0.0 3.33592    
cufflinks 1.48952 0.0 8.26979    
cufflinks 0.464068 0.0 2.08766    
cufflinks 0.123        
cufflinks 0.202        
cufflinks 0.065     Low  
cufflinks 0.087     Low  
cufflinks 0.016     Low Low
cufflinks 0.07        
cufflinks 0.072     Low  
cufflinks 1.083       High
cufflinks 0.178        
cufflinks 0.029     Low Low
cufflinks 0.126        
cufflinks 0.226        
cufflinks 0.087     Low  
cufflinks 0.036     Low Low
cufflinks 0.182        
cufflinks 0.111        
cufflinks 0.223        

0 Strain