Gene : Glyma.19G153900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12550:SF5 - HUA2-LIKE PROTEIN 2-RELATED Genomic Order:  1539
Name:  ? Glyma.19G153900 Secondary Identifier:  ? PAC:30513403
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G153900 0.5kb upstream 0.5kb upstream 15914 true Chr19: 41412366-41428279 Glycine max
Glyma.19G153900 0.5kb upstream 0.5kb upstream 500 false Chr19: 41412366-41412865 Glycine max
Glyma.19G153900 0.5kb downstream 0.5kb downstream 15914 true Chr19: 41412866-41428779 Glycine max
Glyma.19G153900 0.5kb downstream 0.5kb downstream 500 false Chr19: 41428280-41428779 Glycine max
Glyma.19G153900 1.0kb upstream 1.0kb upstream 16414 true Chr19: 41411866-41428279 Glycine max
Glyma.19G153900 1.0kb upstream 1.0kb upstream 1000 false Chr19: 41411866-41412865 Glycine max
Glyma.19G153900 1.0kb downstream 1.0kb downstream 16414 true Chr19: 41412866-41429279 Glycine max
Glyma.19G153900 1.0kb downstream 1.0kb downstream 1000 false Chr19: 41428280-41429279 Glycine max
Glyma.19G153900 2.0kb upstream 2.0kb upstream 17414 true Chr19: 41410866-41428279 Glycine max
Glyma.19G153900 2.0kb upstream 2.0kb upstream 2000 false Chr19: 41410866-41412865 Glycine max
Glyma.19G153900 2.0kb downstream 2.0kb downstream 17414 true Chr19: 41412866-41430279 Glycine max
Glyma.19G153900 2.0kb downstream 2.0kb downstream 2000 false Chr19: 41428280-41430279 Glycine max
Glyma.19G153900 5.0kb upstream 5.0kb upstream 20414 true Chr19: 41407866-41428279 Glycine max
Glyma.19G153900 5.0kb upstream 5.0kb upstream 5000 false Chr19: 41407866-41412865 Glycine max
Glyma.19G153900 5.0kb downstream 5.0kb downstream 20414 true Chr19: 41412866-41433279 Glycine max
Glyma.19G153900 5.0kb downstream 5.0kb downstream 5000 false Chr19: 41428280-41433279 Glycine max
Glyma.19G153900 10.0kb upstream 10.0kb upstream 25414 true Chr19: 41402866-41428279 Glycine max
Glyma.19G153900 10.0kb upstream 10.0kb upstream 10000 false Chr19: 41402866-41412865 Glycine max
Glyma.19G153900 10.0kb downstream 10.0kb downstream 25414 true Chr19: 41412866-41438279 Glycine max
Glyma.19G153900 10.0kb downstream 10.0kb downstream 10000 false Chr19: 41428280-41438279 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296552 5265 Fabidae View MSA
124068925 5270 Rosid View MSA
123739923 5271 Pentapetalae View MSA
122787365 5272 Eudicot View MSA
122045981 5273 Angiosperm View MSA
121348471 5274 Embryophyte View MSA
123424079 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.77936 0.0 16.5755    
cufflinks 3.85803 0.0 13.5696    
cufflinks 3.34356 0.0 11.9938   Low
cufflinks 5.94584 0.0 26.8431   High
cufflinks 4.01867 0.0 17.9723    
cufflinks 3.44054 0.0 13.9432   Low
cufflinks 6.97826 0.0 23.9146   High
cufflinks 4.36828 0.0 18.9798    
cufflinks 4.29316 0.0 19.6369    
cufflinks 0.359        
cufflinks 0.153       Low
cufflinks 0.447        
cufflinks 0.418        
cufflinks 0.472        
cufflinks 0.335        
cufflinks 0.424        
cufflinks 0.288        
cufflinks 0.542       High
cufflinks 0.517        
cufflinks 0.465        
cufflinks 0.245       Low
cufflinks 0.521        
cufflinks 0.529        
cufflinks 0.231       Low
cufflinks 0.416        
cufflinks 0.22       Low

0 Strain