Gene : Glyma.04G055300 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR34455:SF1 - EXPRESSED PROTEIN Genomic Order:  553
Name:  ? Glyma.04G055300 Secondary Identifier:  ? PAC:30490667
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G055300 0.5kb upstream 0.5kb upstream 1216 true Chr04: 4462197-4463412 Glycine max
Glyma.04G055300 0.5kb upstream 0.5kb upstream 500 false Chr04: 4462197-4462696 Glycine max
Glyma.04G055300 0.5kb downstream 0.5kb downstream 1216 true Chr04: 4462697-4463912 Glycine max
Glyma.04G055300 0.5kb downstream 0.5kb downstream 500 false Chr04: 4463413-4463912 Glycine max
Glyma.04G055300 1.0kb upstream 1.0kb upstream 1716 true Chr04: 4461697-4463412 Glycine max
Glyma.04G055300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4461697-4462696 Glycine max
Glyma.04G055300 1.0kb downstream 1.0kb downstream 1716 true Chr04: 4462697-4464412 Glycine max
Glyma.04G055300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4463413-4464412 Glycine max
Glyma.04G055300 2.0kb upstream 2.0kb upstream 2716 true Chr04: 4460697-4463412 Glycine max
Glyma.04G055300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4460697-4462696 Glycine max
Glyma.04G055300 2.0kb downstream 2.0kb downstream 2716 true Chr04: 4462697-4465412 Glycine max
Glyma.04G055300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4463413-4465412 Glycine max
Glyma.04G055300 5.0kb upstream 5.0kb upstream 5716 true Chr04: 4457697-4463412 Glycine max
Glyma.04G055300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4457697-4462696 Glycine max
Glyma.04G055300 5.0kb downstream 5.0kb downstream 5716 true Chr04: 4462697-4468412 Glycine max
Glyma.04G055300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4463413-4468412 Glycine max
Glyma.04G055300 10.0kb upstream 10.0kb upstream 10716 true Chr04: 4452697-4463412 Glycine max
Glyma.04G055300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4452697-4462696 Glycine max
Glyma.04G055300 10.0kb downstream 10.0kb downstream 10716 true Chr04: 4462697-4473412 Glycine max
Glyma.04G055300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4463413-4473412 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311753 5265 Fabidae View MSA
124072175 5270 Rosid View MSA
123739685 5271 Pentapetalae View MSA
122793757 5272 Eudicot View MSA
122041544 5273 Angiosperm View MSA
121346235 5274 Embryophyte View MSA
123428099 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 402.034 0.0 1358.86 High  
cufflinks 485.472 0.0 1723.05 High  
cufflinks 245.802 0.0 754.887 High  
cufflinks 199.598 0.0 594.583 High  
cufflinks 42.6989 0.0 114.013 High Low
cufflinks 30.6897 0.0 82.7638 High Low
cufflinks 1948.37 0.0 11312.4 High High
cufflinks 230.597 0.0 706.714 High  
cufflinks 32.697 0.0 87.8606 High Low
cufflinks 303.234     High  
cufflinks 1.059        
cufflinks 179.522     High  
cufflinks 0.36       Low
cufflinks 1.096        
cufflinks 3.338        
cufflinks 664.175     High High
cufflinks 0.378       Low
cufflinks 235.767     High  
cufflinks 299.753     High  
cufflinks 824.012     High High
cufflinks 0.934        
cufflinks 702.02     High High
cufflinks 543.664     High  
cufflinks 1.07        
cufflinks 837.62     High High
cufflinks 0.312       Low

0 Strain