Gene : Glyma.04G057800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31561:SF2 - 3-KETOACYL-COA SYNTHASE 10 Genomic Order:  578
Name:  ? Glyma.04G057800 Secondary Identifier:  ? PAC:30488760
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5080 Glycine max pathologic  
Gmax PWY-6433 Glycine max pathologic  
Gmax PWY-6598 Glycine max pathologic  
Gmax PWY-7036 Glycine max pathologic  
Gmax PWY-7601 Glycine max pathologic  
Gmax PWY-7619 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G057800 0.5kb upstream 0.5kb upstream 5887 true Chr04: 4732871-4738757 Glycine max
Glyma.04G057800 0.5kb upstream 0.5kb upstream 500 false Chr04: 4732871-4733370 Glycine max
Glyma.04G057800 0.5kb downstream 0.5kb downstream 5887 true Chr04: 4733371-4739257 Glycine max
Glyma.04G057800 0.5kb downstream 0.5kb downstream 500 false Chr04: 4738758-4739257 Glycine max
Glyma.04G057800 1.0kb upstream 1.0kb upstream 6387 true Chr04: 4732371-4738757 Glycine max
Glyma.04G057800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4732371-4733370 Glycine max
Glyma.04G057800 1.0kb downstream 1.0kb downstream 6387 true Chr04: 4733371-4739757 Glycine max
Glyma.04G057800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4738758-4739757 Glycine max
Glyma.04G057800 2.0kb upstream 2.0kb upstream 7387 true Chr04: 4731371-4738757 Glycine max
Glyma.04G057800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4731371-4733370 Glycine max
Glyma.04G057800 2.0kb downstream 2.0kb downstream 7387 true Chr04: 4733371-4740757 Glycine max
Glyma.04G057800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4738758-4740757 Glycine max
Glyma.04G057800 5.0kb upstream 5.0kb upstream 10387 true Chr04: 4728371-4738757 Glycine max
Glyma.04G057800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4728371-4733370 Glycine max
Glyma.04G057800 5.0kb downstream 5.0kb downstream 10387 true Chr04: 4733371-4743757 Glycine max
Glyma.04G057800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4738758-4743757 Glycine max
Glyma.04G057800 10.0kb upstream 10.0kb upstream 15387 true Chr04: 4723371-4738757 Glycine max
Glyma.04G057800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4723371-4733370 Glycine max
Glyma.04G057800 10.0kb downstream 10.0kb downstream 15387 true Chr04: 4733371-4748757 Glycine max
Glyma.04G057800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4738758-4748757 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308188 5265 Fabidae View MSA
124063374 5270 Rosid View MSA
123749222 5271 Pentapetalae View MSA
122793807 5272 Eudicot View MSA
122045773 5273 Angiosperm View MSA
121310500 5274 Embryophyte View MSA
123347968 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 49.8449 0.0 143.909 High  
cufflinks 166.891 0.0 604.571 High High
cufflinks 55.5903 0.0 162.312 High  
cufflinks 33.9988 0.0 93.9437 High  
cufflinks 4.54293 0.0 12.9973    
cufflinks 33.4471 0.0 92.414 High  
cufflinks 0.938924 0.0 3.28772   Low
cufflinks 26.0727 0.0 70.6562 High  
cufflinks 0.236838 0.0 0.899004 Low Low
cufflinks 10.876     High  
cufflinks 0.056        
cufflinks 25.375     High  
cufflinks 0.015     Low Low
cufflinks 0.003     Low Low
cufflinks 0.014     Low Low
cufflinks 18.677     High  
cufflinks 0.045     Low  
cufflinks 26.764     High  
cufflinks 95.588     High High
cufflinks 17.049     High  
cufflinks 0.105        
cufflinks 20.669     High  
cufflinks 18.284     High  
cufflinks 0.025     Low  
cufflinks 18.631     High  
cufflinks 0.017     Low Low

0 Strain