Gene : Glyma.04G006200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR34574:SF2 - EF-HAND CONTAINING PROTEIN-LIKE Genomic Order:  62
Name:  ? Glyma.04G006200 Secondary Identifier:  ? PAC:30488349
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G006200 0.5kb upstream 0.5kb upstream 7099 true Chr04: 488212-495310 Glycine max
Glyma.04G006200 0.5kb upstream 0.5kb upstream 500 false Chr04: 494811-495310 Glycine max
Glyma.04G006200 0.5kb downstream 0.5kb downstream 7099 true Chr04: 487712-494810 Glycine max
Glyma.04G006200 0.5kb downstream 0.5kb downstream 500 false Chr04: 487712-488211 Glycine max
Glyma.04G006200 1.0kb upstream 1.0kb upstream 7599 true Chr04: 488212-495810 Glycine max
Glyma.04G006200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 494811-495810 Glycine max
Glyma.04G006200 1.0kb downstream 1.0kb downstream 7599 true Chr04: 487212-494810 Glycine max
Glyma.04G006200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 487212-488211 Glycine max
Glyma.04G006200 2.0kb upstream 2.0kb upstream 8599 true Chr04: 488212-496810 Glycine max
Glyma.04G006200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 494811-496810 Glycine max
Glyma.04G006200 2.0kb downstream 2.0kb downstream 8599 true Chr04: 486212-494810 Glycine max
Glyma.04G006200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 486212-488211 Glycine max
Glyma.04G006200 5.0kb upstream 5.0kb upstream 11599 true Chr04: 488212-499810 Glycine max
Glyma.04G006200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 494811-499810 Glycine max
Glyma.04G006200 5.0kb downstream 5.0kb downstream 11599 true Chr04: 483212-494810 Glycine max
Glyma.04G006200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 483212-488211 Glycine max
Glyma.04G006200 10.0kb upstream 10.0kb upstream 16599 true Chr04: 488212-504810 Glycine max
Glyma.04G006200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 494811-504810 Glycine max
Glyma.04G006200 10.0kb downstream 10.0kb downstream 16599 true Chr04: 478212-494810 Glycine max
Glyma.04G006200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 478212-488211 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314356 5265 Fabidae View MSA
124062130 5270 Rosid View MSA
123739646 5271 Pentapetalae View MSA
122789381 5272 Eudicot View MSA
122043203 5273 Angiosperm View MSA
121346779 5274 Embryophyte View MSA
123380443 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.822287 0.0 5.74944    
cufflinks 7.86824 0.0 35.8069   High
cufflinks 5.43737 0.0 26.9475    
cufflinks 4.26008 0.0 23.3145    
cufflinks 1.79809 0.0 11.9496    
cufflinks 0.571258 0.0 3.43448   Low
cufflinks 7.67575 0.0 31.8653   High
cufflinks 1.66077 0.0 9.6215    
cufflinks 0.475389 0.0 3.42058   Low
cufflinks 1.489       High
cufflinks 0.026     Low Low
cufflinks 0.638        
cufflinks 0.013     Low Low
cufflinks 0.026     Low Low
cufflinks 0.077        
cufflinks 0.51        
cufflinks 0.11        
cufflinks 1.309       High
cufflinks 0.651        
cufflinks 0.605        
cufflinks 0.026     Low Low
cufflinks 0.655        
cufflinks 0.524        
cufflinks 0.007     Low Low
cufflinks 0.604        
cufflinks 0.031     Low  

0 Strain