Gene : Glyma.04G007400 G. max Wm82.a2.v1
Defline:  (1 of 1) 1.3.1.89 - tRNA-dihydrouridine(47) synthase (NAD(P)(+)) / tRNA-dihydrouridine synthase 3 Genomic Order:  74
Name:  ? Glyma.04G007400 Secondary Identifier:  ? PAC:30488084
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G007400 0.5kb upstream 0.5kb upstream 5914 true Chr04: 570602-576515 Glycine max
Glyma.04G007400 0.5kb upstream 0.5kb upstream 500 false Chr04: 576016-576515 Glycine max
Glyma.04G007400 0.5kb downstream 0.5kb downstream 5914 true Chr04: 570102-576015 Glycine max
Glyma.04G007400 0.5kb downstream 0.5kb downstream 500 false Chr04: 570102-570601 Glycine max
Glyma.04G007400 1.0kb upstream 1.0kb upstream 6414 true Chr04: 570602-577015 Glycine max
Glyma.04G007400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 576016-577015 Glycine max
Glyma.04G007400 1.0kb downstream 1.0kb downstream 6414 true Chr04: 569602-576015 Glycine max
Glyma.04G007400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 569602-570601 Glycine max
Glyma.04G007400 2.0kb upstream 2.0kb upstream 7414 true Chr04: 570602-578015 Glycine max
Glyma.04G007400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 576016-578015 Glycine max
Glyma.04G007400 2.0kb downstream 2.0kb downstream 7414 true Chr04: 568602-576015 Glycine max
Glyma.04G007400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 568602-570601 Glycine max
Glyma.04G007400 5.0kb upstream 5.0kb upstream 10414 true Chr04: 570602-581015 Glycine max
Glyma.04G007400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 576016-581015 Glycine max
Glyma.04G007400 5.0kb downstream 5.0kb downstream 10414 true Chr04: 565602-576015 Glycine max
Glyma.04G007400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 565602-570601 Glycine max
Glyma.04G007400 10.0kb upstream 10.0kb upstream 15414 true Chr04: 570602-586015 Glycine max
Glyma.04G007400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 576016-586015 Glycine max
Glyma.04G007400 10.0kb downstream 10.0kb downstream 15414 true Chr04: 560602-576015 Glycine max
Glyma.04G007400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 560602-570601 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301677 5265 Fabidae View MSA
124062721 5270 Rosid View MSA
123739972 5271 Pentapetalae View MSA
122787852 5272 Eudicot View MSA
122047874 5273 Angiosperm View MSA
121343819 5274 Embryophyte View MSA
123428585 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.4753 0.0 27.9703   Low
cufflinks 30.6998 0.0 85.9398 High High
cufflinks 27.5206 0.0 76.3269 High  
cufflinks 20.9677 0.0 56.9211 High  
cufflinks 19.6627 0.0 53.1559    
cufflinks 10.2713 0.0 27.4317   Low
cufflinks 27.0655 0.0 74.7846 High  
cufflinks 20.9931 0.0 56.9901    
cufflinks 18.6406 0.0 50.2514    
cufflinks 6.884        
cufflinks 4.68       Low
cufflinks 13.471     High  
cufflinks 10.708     High  
cufflinks 14.189     High  
cufflinks 23.028     High High
cufflinks 8.301     High  
cufflinks 4.766       Low
cufflinks 13.695     High  
cufflinks 13.922     High  
cufflinks 7.289     High  
cufflinks 4.767       Low
cufflinks 8.075     High  
cufflinks 13.427     High  
cufflinks 3.753       Low
cufflinks 8.133     High  
cufflinks 3.839       Low

0 Strain