Gene : Glyma.19G143100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR24078:SF276 - CHAPERONE PROTEIN DNAJ 6 Genomic Order:  1431
Name:  ? Glyma.19G143100 Secondary Identifier:  ? PAC:30512633
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G143100 0.5kb upstream 0.5kb upstream 3471 true Chr19: 40408474-40411944 Glycine max
Glyma.19G143100 0.5kb upstream 0.5kb upstream 500 false Chr19: 40411445-40411944 Glycine max
Glyma.19G143100 0.5kb downstream 0.5kb downstream 3471 true Chr19: 40407974-40411444 Glycine max
Glyma.19G143100 0.5kb downstream 0.5kb downstream 500 false Chr19: 40407974-40408473 Glycine max
Glyma.19G143100 1.0kb upstream 1.0kb upstream 3971 true Chr19: 40408474-40412444 Glycine max
Glyma.19G143100 1.0kb upstream 1.0kb upstream 1000 false Chr19: 40411445-40412444 Glycine max
Glyma.19G143100 1.0kb downstream 1.0kb downstream 3971 true Chr19: 40407474-40411444 Glycine max
Glyma.19G143100 1.0kb downstream 1.0kb downstream 1000 false Chr19: 40407474-40408473 Glycine max
Glyma.19G143100 2.0kb upstream 2.0kb upstream 4971 true Chr19: 40408474-40413444 Glycine max
Glyma.19G143100 2.0kb upstream 2.0kb upstream 2000 false Chr19: 40411445-40413444 Glycine max
Glyma.19G143100 2.0kb downstream 2.0kb downstream 4971 true Chr19: 40406474-40411444 Glycine max
Glyma.19G143100 2.0kb downstream 2.0kb downstream 2000 false Chr19: 40406474-40408473 Glycine max
Glyma.19G143100 5.0kb upstream 5.0kb upstream 7971 true Chr19: 40408474-40416444 Glycine max
Glyma.19G143100 5.0kb upstream 5.0kb upstream 5000 false Chr19: 40411445-40416444 Glycine max
Glyma.19G143100 5.0kb downstream 5.0kb downstream 7971 true Chr19: 40403474-40411444 Glycine max
Glyma.19G143100 5.0kb downstream 5.0kb downstream 5000 false Chr19: 40403474-40408473 Glycine max
Glyma.19G143100 10.0kb upstream 10.0kb upstream 12971 true Chr19: 40408474-40421444 Glycine max
Glyma.19G143100 10.0kb upstream 10.0kb upstream 10000 false Chr19: 40411445-40421444 Glycine max
Glyma.19G143100 10.0kb downstream 10.0kb downstream 12971 true Chr19: 40398474-40411444 Glycine max
Glyma.19G143100 10.0kb downstream 10.0kb downstream 10000 false Chr19: 40398474-40408473 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026181 5273 Angiosperm View MSA
122312138 5265 Fabidae View MSA
124061055 5270 Rosid View MSA
123736570 5271 Pentapetalae View MSA
122788654 5272 Eudicot View MSA
121344155 5274 Embryophyte View MSA
123428818 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.703444 0.0 4.26803   Low
cufflinks 11.3412 0.0 45.2649   High
cufflinks 2.18772 0.0 12.5285    
cufflinks 2.58345 0.0 14.3037    
cufflinks 5.78173 0.0 24.215    
cufflinks 6.15281 0.0 28.6493    
cufflinks 3.71477 0.0 18.302    
cufflinks 5.82698 0.0 24.2643    
cufflinks 6.74138 0.0 30.2394    
cufflinks 0.956        
cufflinks 0.237       Low
cufflinks 0.757        
cufflinks 2.126       High
cufflinks 1.478       High
cufflinks 0.113       Low
cufflinks 0.6        
cufflinks 0.566        
cufflinks 0.57        
cufflinks 2.65       High
cufflinks 0.399        
cufflinks 0.408        
cufflinks 0.446        
cufflinks 1.354        
cufflinks 0.255       Low
cufflinks 0.465        
cufflinks 0.531        

0 Strain