Gene : Glyma.04G016600 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11216:SF72 - CALCIUM-BINDING EF HAND-CONTAINING PROTEIN Genomic Order:  166
Name:  ? Glyma.04G016600 Secondary Identifier:  ? PAC:30489400
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G016600 0.5kb upstream 0.5kb upstream 11008 true Chr04: 1250315-1261322 Glycine max
Glyma.04G016600 0.5kb upstream 0.5kb upstream 500 false Chr04: 1260823-1261322 Glycine max
Glyma.04G016600 0.5kb downstream 0.5kb downstream 11008 true Chr04: 1249815-1260822 Glycine max
Glyma.04G016600 0.5kb downstream 0.5kb downstream 500 false Chr04: 1249815-1250314 Glycine max
Glyma.04G016600 1.0kb upstream 1.0kb upstream 11508 true Chr04: 1250315-1261822 Glycine max
Glyma.04G016600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 1260823-1261822 Glycine max
Glyma.04G016600 1.0kb downstream 1.0kb downstream 11508 true Chr04: 1249315-1260822 Glycine max
Glyma.04G016600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 1249315-1250314 Glycine max
Glyma.04G016600 2.0kb upstream 2.0kb upstream 12508 true Chr04: 1250315-1262822 Glycine max
Glyma.04G016600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 1260823-1262822 Glycine max
Glyma.04G016600 2.0kb downstream 2.0kb downstream 12508 true Chr04: 1248315-1260822 Glycine max
Glyma.04G016600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 1248315-1250314 Glycine max
Glyma.04G016600 5.0kb upstream 5.0kb upstream 15508 true Chr04: 1250315-1265822 Glycine max
Glyma.04G016600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 1260823-1265822 Glycine max
Glyma.04G016600 5.0kb downstream 5.0kb downstream 15508 true Chr04: 1245315-1260822 Glycine max
Glyma.04G016600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 1245315-1250314 Glycine max
Glyma.04G016600 10.0kb upstream 10.0kb upstream 20508 true Chr04: 1250315-1270822 Glycine max
Glyma.04G016600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 1260823-1270822 Glycine max
Glyma.04G016600 10.0kb downstream 10.0kb downstream 20508 true Chr04: 1240315-1260822 Glycine max
Glyma.04G016600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 1240315-1250314 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303982 5265 Fabidae View MSA
124065520 5270 Rosid View MSA
123746825 5271 Pentapetalae View MSA
122791981 5272 Eudicot View MSA
122047031 5273 Angiosperm View MSA
121346987 5274 Embryophyte View MSA
123426341 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.6979 0.0 71.2819   Low
cufflinks 17.3242 0.0 55.7254   Low
cufflinks 25.5903 0.0 106.529 High  
cufflinks 26.7552 0.0 115.01 High High
cufflinks 22.4 0.0 89.2538 High  
cufflinks 20.0114 0.0 77.4489    
cufflinks 26.4597 0.0 94.4836 High High
cufflinks 23.8162 0.0 96.7255 High  
cufflinks 23.6298 0.0 95.4914 High  
cufflinks 5.309       High
cufflinks 5.037        
cufflinks 4.374        
cufflinks 4.996        
cufflinks 5.039        
cufflinks 4.942        
cufflinks 3.908        
cufflinks 4.187        
cufflinks 4.801        
cufflinks 4.342        
cufflinks 3.934        
cufflinks 5.133        
cufflinks 3.992        
cufflinks 3.111       Low
cufflinks 5.418       High
cufflinks 3.722       Low
cufflinks 4.73        

0 Strain