Gene : Glyma.19G143600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31344:SF4 - NUCLEOLAR PROTEIN GAR2-LIKE PROTEIN Genomic Order:  1436
Name:  ? Glyma.19G143600 Secondary Identifier:  ? PAC:30514929
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G143600 0.5kb upstream 0.5kb upstream 7270 true Chr19: 40471911-40479180 Glycine max
Glyma.19G143600 0.5kb upstream 0.5kb upstream 500 false Chr19: 40478681-40479180 Glycine max
Glyma.19G143600 0.5kb downstream 0.5kb downstream 7270 true Chr19: 40471411-40478680 Glycine max
Glyma.19G143600 0.5kb downstream 0.5kb downstream 500 false Chr19: 40471411-40471910 Glycine max
Glyma.19G143600 1.0kb upstream 1.0kb upstream 7770 true Chr19: 40471911-40479680 Glycine max
Glyma.19G143600 1.0kb upstream 1.0kb upstream 1000 false Chr19: 40478681-40479680 Glycine max
Glyma.19G143600 1.0kb downstream 1.0kb downstream 7770 true Chr19: 40470911-40478680 Glycine max
Glyma.19G143600 1.0kb downstream 1.0kb downstream 1000 false Chr19: 40470911-40471910 Glycine max
Glyma.19G143600 2.0kb upstream 2.0kb upstream 8770 true Chr19: 40471911-40480680 Glycine max
Glyma.19G143600 2.0kb upstream 2.0kb upstream 2000 false Chr19: 40478681-40480680 Glycine max
Glyma.19G143600 2.0kb downstream 2.0kb downstream 8770 true Chr19: 40469911-40478680 Glycine max
Glyma.19G143600 2.0kb downstream 2.0kb downstream 2000 false Chr19: 40469911-40471910 Glycine max
Glyma.19G143600 5.0kb upstream 5.0kb upstream 11770 true Chr19: 40471911-40483680 Glycine max
Glyma.19G143600 5.0kb upstream 5.0kb upstream 5000 false Chr19: 40478681-40483680 Glycine max
Glyma.19G143600 5.0kb downstream 5.0kb downstream 11770 true Chr19: 40466911-40478680 Glycine max
Glyma.19G143600 5.0kb downstream 5.0kb downstream 5000 false Chr19: 40466911-40471910 Glycine max
Glyma.19G143600 10.0kb upstream 10.0kb upstream 16770 true Chr19: 40471911-40488680 Glycine max
Glyma.19G143600 10.0kb upstream 10.0kb upstream 10000 false Chr19: 40478681-40488680 Glycine max
Glyma.19G143600 10.0kb downstream 10.0kb downstream 16770 true Chr19: 40461911-40478680 Glycine max
Glyma.19G143600 10.0kb downstream 10.0kb downstream 10000 false Chr19: 40461911-40471910 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304118 5265 Fabidae View MSA
124068078 5270 Rosid View MSA
123737150 5271 Pentapetalae View MSA
122789303 5272 Eudicot View MSA
122047501 5273 Angiosperm View MSA
121349213 5274 Embryophyte View MSA
123425563 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.9717 0.0 29.52    
cufflinks 6.67518 0.0 27.8168    
cufflinks 4.42695 0.0 19.6344    
cufflinks 4.20558 0.0 18.9556    
cufflinks 9.88948 0.0 37.7204    
cufflinks 13.1092 0.0 54.1389   High
cufflinks 4.07761 0.0 18.4895    
cufflinks 17.2139 0.0 74.0413   High
cufflinks 3.51444 0.0 16.6484   Low
cufflinks 4.38       High
cufflinks 0.149       Low
cufflinks 0.643        
cufflinks 2.024       High
cufflinks 1.362        
cufflinks 0.026     Low Low
cufflinks 0.732        
cufflinks 1.08        
cufflinks 0.746        
cufflinks 0.717        
cufflinks 0.362        
cufflinks 0.332        
cufflinks 0.464        
cufflinks 0.56        
cufflinks 0.092       Low
cufflinks 0.479        
cufflinks 0.586        

0 Strain