Gene : Glyma.04G014600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31500:SF0 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN Genomic Order:  146
Name:  ? Glyma.04G014600 Secondary Identifier:  ? PAC:30489183
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G014600 0.5kb upstream 0.5kb upstream 4568 true Chr04: 1118608-1123175 Glycine max
Glyma.04G014600 0.5kb upstream 0.5kb upstream 500 false Chr04: 1118608-1119107 Glycine max
Glyma.04G014600 0.5kb downstream 0.5kb downstream 4568 true Chr04: 1119108-1123675 Glycine max
Glyma.04G014600 0.5kb downstream 0.5kb downstream 500 false Chr04: 1123176-1123675 Glycine max
Glyma.04G014600 1.0kb upstream 1.0kb upstream 5068 true Chr04: 1118108-1123175 Glycine max
Glyma.04G014600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 1118108-1119107 Glycine max
Glyma.04G014600 1.0kb downstream 1.0kb downstream 5068 true Chr04: 1119108-1124175 Glycine max
Glyma.04G014600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 1123176-1124175 Glycine max
Glyma.04G014600 2.0kb upstream 2.0kb upstream 6068 true Chr04: 1117108-1123175 Glycine max
Glyma.04G014600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 1117108-1119107 Glycine max
Glyma.04G014600 2.0kb downstream 2.0kb downstream 6068 true Chr04: 1119108-1125175 Glycine max
Glyma.04G014600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 1123176-1125175 Glycine max
Glyma.04G014600 5.0kb upstream 5.0kb upstream 9068 true Chr04: 1114108-1123175 Glycine max
Glyma.04G014600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 1114108-1119107 Glycine max
Glyma.04G014600 5.0kb downstream 5.0kb downstream 9068 true Chr04: 1119108-1128175 Glycine max
Glyma.04G014600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 1123176-1128175 Glycine max
Glyma.04G014600 10.0kb upstream 10.0kb upstream 14068 true Chr04: 1109108-1123175 Glycine max
Glyma.04G014600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 1109108-1119107 Glycine max
Glyma.04G014600 10.0kb downstream 10.0kb downstream 14068 true Chr04: 1119108-1133175 Glycine max
Glyma.04G014600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 1123176-1133175 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304333 5265 Fabidae View MSA
124069070 5270 Rosid View MSA
123753724 5271 Pentapetalae View MSA
122796118 5272 Eudicot View MSA
122049850 5273 Angiosperm View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.73346 0.0 20.4628   Low
cufflinks 35.4768 0.0 115.811 High High
cufflinks 16.2328 0.0 50.2023    
cufflinks 20.3472 0.0 63.2756 High  
cufflinks 7.00274 0.0 23.9932    
cufflinks 5.82234 0.0 20.5999   Low
cufflinks 36.6247 0.0 121.154 High High
cufflinks 16.4546 0.0 51.479    
cufflinks 11.0471 0.0 35.0319    
cufflinks 2.228        
cufflinks 1.245        
cufflinks 3.754        
cufflinks 0.831       Low
cufflinks 0.611       Low
cufflinks 2.07        
cufflinks 4.199        
cufflinks 0.901       Low
cufflinks 2.124        
cufflinks 9.066     High High
cufflinks 3.075        
cufflinks 1.326        
cufflinks 4.003        
cufflinks 6.897       High
cufflinks 1.099        
cufflinks 3.42        
cufflinks 0.88       Low

0 Strain