Gene : Glyma.19G143700 G. max Wm82.a2.v1
Defline:  (1 of 1) 3.2.1.82 - Exo-poly-alpha-galacturonosidase / Exopolygalacturanosidase Genomic Order:  1437
Name:  ? Glyma.19G143700 Secondary Identifier:  ? PAC:30514643
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G143700 0.5kb upstream 0.5kb upstream 3486 true Chr19: 40491825-40495310 Glycine max
Glyma.19G143700 0.5kb upstream 0.5kb upstream 500 false Chr19: 40494811-40495310 Glycine max
Glyma.19G143700 0.5kb downstream 0.5kb downstream 3486 true Chr19: 40491325-40494810 Glycine max
Glyma.19G143700 0.5kb downstream 0.5kb downstream 500 false Chr19: 40491325-40491824 Glycine max
Glyma.19G143700 1.0kb upstream 1.0kb upstream 3986 true Chr19: 40491825-40495810 Glycine max
Glyma.19G143700 1.0kb upstream 1.0kb upstream 1000 false Chr19: 40494811-40495810 Glycine max
Glyma.19G143700 1.0kb downstream 1.0kb downstream 3986 true Chr19: 40490825-40494810 Glycine max
Glyma.19G143700 1.0kb downstream 1.0kb downstream 1000 false Chr19: 40490825-40491824 Glycine max
Glyma.19G143700 2.0kb upstream 2.0kb upstream 4986 true Chr19: 40491825-40496810 Glycine max
Glyma.19G143700 2.0kb upstream 2.0kb upstream 2000 false Chr19: 40494811-40496810 Glycine max
Glyma.19G143700 2.0kb downstream 2.0kb downstream 4986 true Chr19: 40489825-40494810 Glycine max
Glyma.19G143700 2.0kb downstream 2.0kb downstream 2000 false Chr19: 40489825-40491824 Glycine max
Glyma.19G143700 5.0kb upstream 5.0kb upstream 7986 true Chr19: 40491825-40499810 Glycine max
Glyma.19G143700 5.0kb upstream 5.0kb upstream 5000 false Chr19: 40494811-40499810 Glycine max
Glyma.19G143700 5.0kb downstream 5.0kb downstream 7986 true Chr19: 40486825-40494810 Glycine max
Glyma.19G143700 5.0kb downstream 5.0kb downstream 5000 false Chr19: 40486825-40491824 Glycine max
Glyma.19G143700 10.0kb upstream 10.0kb upstream 12986 true Chr19: 40491825-40504810 Glycine max
Glyma.19G143700 10.0kb upstream 10.0kb upstream 10000 false Chr19: 40494811-40504810 Glycine max
Glyma.19G143700 10.0kb downstream 10.0kb downstream 12986 true Chr19: 40481825-40494810 Glycine max
Glyma.19G143700 10.0kb downstream 10.0kb downstream 10000 false Chr19: 40481825-40491824 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302389 5265 Fabidae View MSA
124067071 5270 Rosid View MSA
123738878 5271 Pentapetalae View MSA
122786031 5272 Eudicot View MSA
122041553 5273 Angiosperm View MSA
121343864 5274 Embryophyte View MSA
123425677 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.8076 0.0 31.7331    
cufflinks 8.09829 0.0 22.2697    
cufflinks 11.9818 0.0 32.1933    
cufflinks 14.8489 0.0 39.6692    
cufflinks 9.55697 0.0 25.9291    
cufflinks 31.8475 0.0 86.6298 High High
cufflinks 4.83231 0.0 13.9886   Low
cufflinks 12.6525 0.0 33.9293    
cufflinks 12.4579 0.0 33.414    
cufflinks 7.39        
cufflinks 3.577        
cufflinks 8.397     High High
cufflinks 6.497        
cufflinks 4.664        
cufflinks 1.997       Low
cufflinks 6.924        
cufflinks 1.997       Low
cufflinks 9.418     High High
cufflinks 5.317        
cufflinks 6.811        
cufflinks 3.691        
cufflinks 6.605        
cufflinks 4.032        
cufflinks 4.778        
cufflinks 7.079     High  
cufflinks 2.751       Low

0 Strain