Gene : Glyma.19G143900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12565:SF112 - TRANSCRIPTION FACTOR BHLH48-RELATED Genomic Order:  1439
Name:  ? Glyma.19G143900 Secondary Identifier:  ? PAC:30512705
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G143900 0.5kb upstream 0.5kb upstream 9584 true Chr19: 40499949-40509532 Glycine max
Glyma.19G143900 0.5kb upstream 0.5kb upstream 500 false Chr19: 40509033-40509532 Glycine max
Glyma.19G143900 0.5kb downstream 0.5kb downstream 9584 true Chr19: 40499449-40509032 Glycine max
Glyma.19G143900 0.5kb downstream 0.5kb downstream 500 false Chr19: 40499449-40499948 Glycine max
Glyma.19G143900 1.0kb upstream 1.0kb upstream 10084 true Chr19: 40499949-40510032 Glycine max
Glyma.19G143900 1.0kb upstream 1.0kb upstream 1000 false Chr19: 40509033-40510032 Glycine max
Glyma.19G143900 1.0kb downstream 1.0kb downstream 10084 true Chr19: 40498949-40509032 Glycine max
Glyma.19G143900 1.0kb downstream 1.0kb downstream 1000 false Chr19: 40498949-40499948 Glycine max
Glyma.19G143900 2.0kb upstream 2.0kb upstream 11084 true Chr19: 40499949-40511032 Glycine max
Glyma.19G143900 2.0kb upstream 2.0kb upstream 2000 false Chr19: 40509033-40511032 Glycine max
Glyma.19G143900 2.0kb downstream 2.0kb downstream 11084 true Chr19: 40497949-40509032 Glycine max
Glyma.19G143900 2.0kb downstream 2.0kb downstream 2000 false Chr19: 40497949-40499948 Glycine max
Glyma.19G143900 5.0kb upstream 5.0kb upstream 14084 true Chr19: 40499949-40514032 Glycine max
Glyma.19G143900 5.0kb upstream 5.0kb upstream 5000 false Chr19: 40509033-40514032 Glycine max
Glyma.19G143900 5.0kb downstream 5.0kb downstream 14084 true Chr19: 40494949-40509032 Glycine max
Glyma.19G143900 5.0kb downstream 5.0kb downstream 5000 false Chr19: 40494949-40499948 Glycine max
Glyma.19G143900 10.0kb upstream 10.0kb upstream 19084 true Chr19: 40499949-40519032 Glycine max
Glyma.19G143900 10.0kb upstream 10.0kb upstream 10000 false Chr19: 40509033-40519032 Glycine max
Glyma.19G143900 10.0kb downstream 10.0kb downstream 19084 true Chr19: 40489949-40509032 Glycine max
Glyma.19G143900 10.0kb downstream 10.0kb downstream 10000 false Chr19: 40489949-40499948 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301447 5265 Fabidae View MSA
124063738 5270 Rosid View MSA
123737117 5271 Pentapetalae View MSA
122769887 5272 Eudicot View MSA
122044005 5273 Angiosperm View MSA
121310224 5274 Embryophyte View MSA
123347772 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.0543 0.0 29.6547   High
cufflinks 7.54143 0.0 20.6884    
cufflinks 13.5338 0.0 36.1714   High
cufflinks 5.23106 0.0 14.8461    
cufflinks 1.76486 0.0 5.7517   Low
cufflinks 3.58528 0.0 10.6209    
cufflinks 6.41657 0.0 17.7926    
cufflinks 3.11595 0.0 9.43246    
cufflinks 1.46623 0.0 4.92063   Low
cufflinks 1.244        
cufflinks 0.323        
cufflinks 3.124        
cufflinks 0.162        
cufflinks 0.151       Low
cufflinks 0.136       Low
cufflinks 3.727       High
cufflinks 0.049     Low Low
cufflinks 5.789       High
cufflinks 1.805        
cufflinks 3.624       High
cufflinks 0.187        
cufflinks 3.307        
cufflinks 2.312        
cufflinks 0.445        
cufflinks 3.443        
cufflinks 0.133       Low

0 Strain