Gene : Glyma.19G144000 G. max Wm82.a2.v1
Defline:  (1 of 12) PTHR12290 - CORNICHON-RELATED Genomic Order:  1440
Name:  ? Glyma.19G144000 Secondary Identifier:  ? PAC:30511392
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G144000 0.5kb upstream 0.5kb upstream 4585 true Chr19: 40525813-40530397 Glycine max
Glyma.19G144000 0.5kb upstream 0.5kb upstream 500 false Chr19: 40529898-40530397 Glycine max
Glyma.19G144000 0.5kb downstream 0.5kb downstream 4585 true Chr19: 40525313-40529897 Glycine max
Glyma.19G144000 0.5kb downstream 0.5kb downstream 500 false Chr19: 40525313-40525812 Glycine max
Glyma.19G144000 1.0kb upstream 1.0kb upstream 5085 true Chr19: 40525813-40530897 Glycine max
Glyma.19G144000 1.0kb upstream 1.0kb upstream 1000 false Chr19: 40529898-40530897 Glycine max
Glyma.19G144000 1.0kb downstream 1.0kb downstream 5085 true Chr19: 40524813-40529897 Glycine max
Glyma.19G144000 1.0kb downstream 1.0kb downstream 1000 false Chr19: 40524813-40525812 Glycine max
Glyma.19G144000 2.0kb upstream 2.0kb upstream 6085 true Chr19: 40525813-40531897 Glycine max
Glyma.19G144000 2.0kb upstream 2.0kb upstream 2000 false Chr19: 40529898-40531897 Glycine max
Glyma.19G144000 2.0kb downstream 2.0kb downstream 6085 true Chr19: 40523813-40529897 Glycine max
Glyma.19G144000 2.0kb downstream 2.0kb downstream 2000 false Chr19: 40523813-40525812 Glycine max
Glyma.19G144000 5.0kb upstream 5.0kb upstream 9085 true Chr19: 40525813-40534897 Glycine max
Glyma.19G144000 5.0kb upstream 5.0kb upstream 5000 false Chr19: 40529898-40534897 Glycine max
Glyma.19G144000 5.0kb downstream 5.0kb downstream 9085 true Chr19: 40520813-40529897 Glycine max
Glyma.19G144000 5.0kb downstream 5.0kb downstream 5000 false Chr19: 40520813-40525812 Glycine max
Glyma.19G144000 10.0kb upstream 10.0kb upstream 14085 true Chr19: 40525813-40539897 Glycine max
Glyma.19G144000 10.0kb upstream 10.0kb upstream 10000 false Chr19: 40529898-40539897 Glycine max
Glyma.19G144000 10.0kb downstream 10.0kb downstream 14085 true Chr19: 40515813-40529897 Glycine max
Glyma.19G144000 10.0kb downstream 10.0kb downstream 10000 false Chr19: 40515813-40525812 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311032 5265 Fabidae View MSA
124067439 5270 Rosid View MSA
123752732 5271 Pentapetalae View MSA
122796851 5272 Eudicot View MSA
122045878 5273 Angiosperm View MSA
121348735 5274 Embryophyte View MSA
123427918 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.51086 0.0 26.6049    
cufflinks 4.49228 0.0 26.2325    
cufflinks 4.44783 0.0 25.8418    
cufflinks 3.28728 0.0 21.1153    
cufflinks 14.8076 0.0 60.0206    
cufflinks 62.3196 0.0 237.537 High High
cufflinks 2.64303 0.0 18.014   Low
cufflinks 9.16744 0.0 42.4294    
cufflinks 14.5116 0.0 63.9438    
cufflinks 0.412        
cufflinks 0.176        
cufflinks 0.211        
cufflinks 1.503       High
cufflinks 1.296       High
cufflinks 0.807       High
cufflinks 0.149        
cufflinks 0.81       High
cufflinks 0.258        
cufflinks 0.305        
cufflinks 0.05     Low Low
cufflinks 0.252        
cufflinks 0.07     Low Low
cufflinks 0.066     Low Low
cufflinks 0.323        
cufflinks 0.086     Low Low
cufflinks 0.653        

0 Strain