Gene : Glyma.19G145000 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR11700//PTHR11700:SF10 - 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER Genomic Order:  1450
Name:  ? Glyma.19G145000 Secondary Identifier:  ? PAC:30513686
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G145000 0.5kb upstream 0.5kb upstream 2332 true Chr19: 40592969-40595300 Glycine max
Glyma.19G145000 0.5kb upstream 0.5kb upstream 500 false Chr19: 40592969-40593468 Glycine max
Glyma.19G145000 0.5kb downstream 0.5kb downstream 2332 true Chr19: 40593469-40595800 Glycine max
Glyma.19G145000 0.5kb downstream 0.5kb downstream 500 false Chr19: 40595301-40595800 Glycine max
Glyma.19G145000 1.0kb upstream 1.0kb upstream 2832 true Chr19: 40592469-40595300 Glycine max
Glyma.19G145000 1.0kb upstream 1.0kb upstream 1000 false Chr19: 40592469-40593468 Glycine max
Glyma.19G145000 1.0kb downstream 1.0kb downstream 2832 true Chr19: 40593469-40596300 Glycine max
Glyma.19G145000 1.0kb downstream 1.0kb downstream 1000 false Chr19: 40595301-40596300 Glycine max
Glyma.19G145000 2.0kb upstream 2.0kb upstream 3832 true Chr19: 40591469-40595300 Glycine max
Glyma.19G145000 2.0kb upstream 2.0kb upstream 2000 false Chr19: 40591469-40593468 Glycine max
Glyma.19G145000 2.0kb downstream 2.0kb downstream 3832 true Chr19: 40593469-40597300 Glycine max
Glyma.19G145000 2.0kb downstream 2.0kb downstream 2000 false Chr19: 40595301-40597300 Glycine max
Glyma.19G145000 5.0kb upstream 5.0kb upstream 6832 true Chr19: 40588469-40595300 Glycine max
Glyma.19G145000 5.0kb upstream 5.0kb upstream 5000 false Chr19: 40588469-40593468 Glycine max
Glyma.19G145000 5.0kb downstream 5.0kb downstream 6832 true Chr19: 40593469-40600300 Glycine max
Glyma.19G145000 5.0kb downstream 5.0kb downstream 5000 false Chr19: 40595301-40600300 Glycine max
Glyma.19G145000 10.0kb upstream 10.0kb upstream 11832 true Chr19: 40583469-40595300 Glycine max
Glyma.19G145000 10.0kb upstream 10.0kb upstream 10000 false Chr19: 40583469-40593468 Glycine max
Glyma.19G145000 10.0kb downstream 10.0kb downstream 11832 true Chr19: 40593469-40605300 Glycine max
Glyma.19G145000 10.0kb downstream 10.0kb downstream 10000 false Chr19: 40595301-40605300 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309868 5265 Fabidae View MSA
124068920 5270 Rosid View MSA
123743222 5271 Pentapetalae View MSA
122791885 5272 Eudicot View MSA
122044190 5273 Angiosperm View MSA
121349858 5274 Embryophyte View MSA
123426171 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 98.223 0.0 266.891 High  
cufflinks 133.956 0.0 373.148 High  
cufflinks 64.5038 0.0 172.337 High Low
cufflinks 80.8664 0.0 217.659 High Low
cufflinks 205.29 0.0 604.085 High High
cufflinks 166.727 0.0 475.784 High  
cufflinks 182.143 0.0 527.757 High High
cufflinks 113.278 0.0 311.593 High  
cufflinks 124.342 0.0 344.541 High  
cufflinks 26.789     High  
cufflinks 16.176     High  
cufflinks 20.3     High  
cufflinks 70.001     High High
cufflinks 95.438     High High
cufflinks 12.532     High Low
cufflinks 26.947     High  
cufflinks 21.051     High  
cufflinks 20.679     High  
cufflinks 32.178     High  
cufflinks 21.868     High  
cufflinks 21.955     High  
cufflinks 21.568     High  
cufflinks 25.039     High  
cufflinks 19.653     High  
cufflinks 24.584     High  
cufflinks 23.471     High  

0 Strain