Gene : Glyma.19G145100 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR11700//PTHR11700:SF10 - 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER Genomic Order:  1451
Name:  ? Glyma.19G145100 Secondary Identifier:  ? PAC:30514283
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G145100 0.5kb upstream 0.5kb upstream 2253 true Chr19: 40596813-40599065 Glycine max
Glyma.19G145100 0.5kb upstream 0.5kb upstream 500 false Chr19: 40596813-40597312 Glycine max
Glyma.19G145100 0.5kb downstream 0.5kb downstream 2253 true Chr19: 40597313-40599565 Glycine max
Glyma.19G145100 0.5kb downstream 0.5kb downstream 500 false Chr19: 40599066-40599565 Glycine max
Glyma.19G145100 1.0kb upstream 1.0kb upstream 2753 true Chr19: 40596313-40599065 Glycine max
Glyma.19G145100 1.0kb upstream 1.0kb upstream 1000 false Chr19: 40596313-40597312 Glycine max
Glyma.19G145100 1.0kb downstream 1.0kb downstream 2753 true Chr19: 40597313-40600065 Glycine max
Glyma.19G145100 1.0kb downstream 1.0kb downstream 1000 false Chr19: 40599066-40600065 Glycine max
Glyma.19G145100 2.0kb upstream 2.0kb upstream 3753 true Chr19: 40595313-40599065 Glycine max
Glyma.19G145100 2.0kb upstream 2.0kb upstream 2000 false Chr19: 40595313-40597312 Glycine max
Glyma.19G145100 2.0kb downstream 2.0kb downstream 3753 true Chr19: 40597313-40601065 Glycine max
Glyma.19G145100 2.0kb downstream 2.0kb downstream 2000 false Chr19: 40599066-40601065 Glycine max
Glyma.19G145100 5.0kb upstream 5.0kb upstream 6753 true Chr19: 40592313-40599065 Glycine max
Glyma.19G145100 5.0kb upstream 5.0kb upstream 5000 false Chr19: 40592313-40597312 Glycine max
Glyma.19G145100 5.0kb downstream 5.0kb downstream 6753 true Chr19: 40597313-40604065 Glycine max
Glyma.19G145100 5.0kb downstream 5.0kb downstream 5000 false Chr19: 40599066-40604065 Glycine max
Glyma.19G145100 10.0kb upstream 10.0kb upstream 11753 true Chr19: 40587313-40599065 Glycine max
Glyma.19G145100 10.0kb upstream 10.0kb upstream 10000 false Chr19: 40587313-40597312 Glycine max
Glyma.19G145100 10.0kb downstream 10.0kb downstream 11753 true Chr19: 40597313-40609065 Glycine max
Glyma.19G145100 10.0kb downstream 10.0kb downstream 10000 false Chr19: 40599066-40609065 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309868 5265 Fabidae View MSA
124068920 5270 Rosid View MSA
123743222 5271 Pentapetalae View MSA
122791885 5272 Eudicot View MSA
122044190 5273 Angiosperm View MSA
121349858 5274 Embryophyte View MSA
123426171 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 78.8258 0.0 211.757 High  
cufflinks 78.953 0.0 212.03 High  
cufflinks 29.5549 0.0 80.4539 High Low
cufflinks 53.5835 0.0 142.955 High  
cufflinks 134.899 0.0 377.107 High High
cufflinks 96.008 0.0 260.449 High  
cufflinks 143.446 0.0 403.404 High High
cufflinks 73.6686 0.0 197.565 High  
cufflinks 104.925 0.0 286.508 High  
cufflinks 18.754     High  
cufflinks 5.942     High Low
cufflinks 13.577     High  
cufflinks 49.776     High High
cufflinks 72.217     High High
cufflinks 5.903     High Low
cufflinks 19.965     High  
cufflinks 14.697     High  
cufflinks 15.066     High  
cufflinks 23.998     High  
cufflinks 13.014     High  
cufflinks 10.175     High  
cufflinks 13.935     High  
cufflinks 24.747     High  
cufflinks 7.872     High Low
cufflinks 17.664     High  
cufflinks 14.733     High  

0 Strain