Gene : Glyma.04G020000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13711:SF202 - HIGH MOBILITY GROUP B PROTEIN 10-RELATED Genomic Order:  200
Name:  ? Glyma.04G020000 Secondary Identifier:  ? PAC:30490435
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G020000 0.5kb upstream 0.5kb upstream 2999 true Chr04: 1569646-1572644 Glycine max
Glyma.04G020000 0.5kb upstream 0.5kb upstream 500 false Chr04: 1569646-1570145 Glycine max
Glyma.04G020000 0.5kb downstream 0.5kb downstream 2999 true Chr04: 1570146-1573144 Glycine max
Glyma.04G020000 0.5kb downstream 0.5kb downstream 500 false Chr04: 1572645-1573144 Glycine max
Glyma.04G020000 1.0kb upstream 1.0kb upstream 3499 true Chr04: 1569146-1572644 Glycine max
Glyma.04G020000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 1569146-1570145 Glycine max
Glyma.04G020000 1.0kb downstream 1.0kb downstream 3499 true Chr04: 1570146-1573644 Glycine max
Glyma.04G020000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 1572645-1573644 Glycine max
Glyma.04G020000 2.0kb upstream 2.0kb upstream 4499 true Chr04: 1568146-1572644 Glycine max
Glyma.04G020000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 1568146-1570145 Glycine max
Glyma.04G020000 2.0kb downstream 2.0kb downstream 4499 true Chr04: 1570146-1574644 Glycine max
Glyma.04G020000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 1572645-1574644 Glycine max
Glyma.04G020000 5.0kb upstream 5.0kb upstream 7499 true Chr04: 1565146-1572644 Glycine max
Glyma.04G020000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 1565146-1570145 Glycine max
Glyma.04G020000 5.0kb downstream 5.0kb downstream 7499 true Chr04: 1570146-1577644 Glycine max
Glyma.04G020000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 1572645-1577644 Glycine max
Glyma.04G020000 10.0kb upstream 10.0kb upstream 12499 true Chr04: 1560146-1572644 Glycine max
Glyma.04G020000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 1560146-1570145 Glycine max
Glyma.04G020000 10.0kb downstream 10.0kb downstream 12499 true Chr04: 1570146-1582644 Glycine max
Glyma.04G020000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 1572645-1582644 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305256 5265 Fabidae View MSA
124067121 5270 Rosid View MSA
123749147 5271 Pentapetalae View MSA
122792446 5272 Eudicot View MSA
122048952 5273 Angiosperm View MSA
121343849 5274 Embryophyte View MSA
123424352 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.2953 0.0 33.2951   High
cufflinks 4.52479 0.0 13.5478   High
cufflinks 0.241796 0.0 0.929749    
cufflinks 1.22382 0.0 4.30894    
cufflinks 0.906813 0.0 3.26429    
cufflinks 1.65634 0.0 5.67743    
cufflinks 0.278007 0.0 1.06343    
cufflinks 0.111148 0.0 0.440433 Low Low
cufflinks 0.505778 0.0 1.88086    
cufflinks 0.154       Low
cufflinks 1.017        
cufflinks 0.774        
cufflinks 2.083        
cufflinks 2.391        
cufflinks 0.078       Low
cufflinks 5.099        
cufflinks 0.43        
cufflinks 1.246        
cufflinks 7.114       High
cufflinks 9.863     High High
cufflinks 0.754        
cufflinks 6.371       High
cufflinks 6.438       High
cufflinks 0.274       Low
cufflinks 8.902     High High
cufflinks 0.81        

0 Strain