Gene : Glyma.04G020600 G. max Wm82.a2.v1
Defline:  (1 of 2) 2.1.1.142 - Cycloartenol 24-C-methyltransferase / Sterol C-methyltransferase Genomic Order:  206
Name:  ? Glyma.04G020600 Secondary Identifier:  ? PAC:30489817
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-2541 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G020600 0.5kb upstream 0.5kb upstream 2327 true Chr04: 1625007-1627333 Glycine max
Glyma.04G020600 0.5kb upstream 0.5kb upstream 500 false Chr04: 1625007-1625506 Glycine max
Glyma.04G020600 0.5kb downstream 0.5kb downstream 2327 true Chr04: 1625507-1627833 Glycine max
Glyma.04G020600 0.5kb downstream 0.5kb downstream 500 false Chr04: 1627334-1627833 Glycine max
Glyma.04G020600 1.0kb upstream 1.0kb upstream 2827 true Chr04: 1624507-1627333 Glycine max
Glyma.04G020600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 1624507-1625506 Glycine max
Glyma.04G020600 1.0kb downstream 1.0kb downstream 2827 true Chr04: 1625507-1628333 Glycine max
Glyma.04G020600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 1627334-1628333 Glycine max
Glyma.04G020600 2.0kb upstream 2.0kb upstream 3827 true Chr04: 1623507-1627333 Glycine max
Glyma.04G020600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 1623507-1625506 Glycine max
Glyma.04G020600 2.0kb downstream 2.0kb downstream 3827 true Chr04: 1625507-1629333 Glycine max
Glyma.04G020600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 1627334-1629333 Glycine max
Glyma.04G020600 5.0kb upstream 5.0kb upstream 6827 true Chr04: 1620507-1627333 Glycine max
Glyma.04G020600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 1620507-1625506 Glycine max
Glyma.04G020600 5.0kb downstream 5.0kb downstream 6827 true Chr04: 1625507-1632333 Glycine max
Glyma.04G020600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 1627334-1632333 Glycine max
Glyma.04G020600 10.0kb upstream 10.0kb upstream 11827 true Chr04: 1615507-1627333 Glycine max
Glyma.04G020600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 1615507-1625506 Glycine max
Glyma.04G020600 10.0kb downstream 10.0kb downstream 11827 true Chr04: 1625507-1637333 Glycine max
Glyma.04G020600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 1627334-1637333 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308371 5265 Fabidae View MSA
124062821 5270 Rosid View MSA
123749878 5271 Pentapetalae View MSA
122793633 5272 Eudicot View MSA
122047271 5273 Angiosperm View MSA
121344259 5274 Embryophyte View MSA
123426805 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 60.1369 0.0 173.852 High High
cufflinks 43.8297 0.0 121.487 High  
cufflinks 28.697 0.0 77.155 High Low
cufflinks 49.4065 0.0 138.83 High  
cufflinks 60.291 0.0 175.428 High High
cufflinks 29.4909 0.0 79.7719 High  
cufflinks 24.6618 0.0 66.1833 High Low
cufflinks 42.5689 0.0 117.805 High  
cufflinks 43.5252 0.0 121.062 High  
cufflinks 38.881     High  
cufflinks 8.453     High Low
cufflinks 29.502     High  
cufflinks 36.435     High  
cufflinks 45.112     High  
cufflinks 51.758     High High
cufflinks 33.553     High  
cufflinks 35.166     High  
cufflinks 37.614     High  
cufflinks 32.068     High  
cufflinks 33.98     High  
cufflinks 12.098     High Low
cufflinks 32.761     High  
cufflinks 37.257     High  
cufflinks 7.934     High Low
cufflinks 30.177     High  
cufflinks 16.438     High  

0 Strain