Gene : Glyma.19G145800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12231:SF111 - MATRIX-REMODELING-ASSOCIATED PROTEIN 8 Genomic Order:  1458
Name:  ? Glyma.19G145800 Secondary Identifier:  ? PAC:30511691
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G145800 0.5kb upstream 0.5kb upstream 4625 true Chr19: 40671816-40676440 Glycine max
Glyma.19G145800 0.5kb upstream 0.5kb upstream 500 false Chr19: 40675941-40676440 Glycine max
Glyma.19G145800 0.5kb downstream 0.5kb downstream 4625 true Chr19: 40671316-40675940 Glycine max
Glyma.19G145800 0.5kb downstream 0.5kb downstream 500 false Chr19: 40671316-40671815 Glycine max
Glyma.19G145800 1.0kb upstream 1.0kb upstream 5125 true Chr19: 40671816-40676940 Glycine max
Glyma.19G145800 1.0kb upstream 1.0kb upstream 1000 false Chr19: 40675941-40676940 Glycine max
Glyma.19G145800 1.0kb downstream 1.0kb downstream 5125 true Chr19: 40670816-40675940 Glycine max
Glyma.19G145800 1.0kb downstream 1.0kb downstream 1000 false Chr19: 40670816-40671815 Glycine max
Glyma.19G145800 2.0kb upstream 2.0kb upstream 6125 true Chr19: 40671816-40677940 Glycine max
Glyma.19G145800 2.0kb upstream 2.0kb upstream 2000 false Chr19: 40675941-40677940 Glycine max
Glyma.19G145800 2.0kb downstream 2.0kb downstream 6125 true Chr19: 40669816-40675940 Glycine max
Glyma.19G145800 2.0kb downstream 2.0kb downstream 2000 false Chr19: 40669816-40671815 Glycine max
Glyma.19G145800 5.0kb upstream 5.0kb upstream 9125 true Chr19: 40671816-40680940 Glycine max
Glyma.19G145800 5.0kb upstream 5.0kb upstream 5000 false Chr19: 40675941-40680940 Glycine max
Glyma.19G145800 5.0kb downstream 5.0kb downstream 9125 true Chr19: 40666816-40675940 Glycine max
Glyma.19G145800 5.0kb downstream 5.0kb downstream 5000 false Chr19: 40666816-40671815 Glycine max
Glyma.19G145800 10.0kb upstream 10.0kb upstream 14125 true Chr19: 40671816-40685940 Glycine max
Glyma.19G145800 10.0kb upstream 10.0kb upstream 10000 false Chr19: 40675941-40685940 Glycine max
Glyma.19G145800 10.0kb downstream 10.0kb downstream 14125 true Chr19: 40661816-40675940 Glycine max
Glyma.19G145800 10.0kb downstream 10.0kb downstream 10000 false Chr19: 40661816-40671815 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305196 5265 Fabidae View MSA
124067502 5270 Rosid View MSA
123738309 5271 Pentapetalae View MSA
122792566 5272 Eudicot View MSA
122046652 5273 Angiosperm View MSA
121347654 5274 Embryophyte View MSA
123380591 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.7119 0.0 58.0362   High
cufflinks 24.4986 0.0 65.3718 High High
cufflinks 4.89541 0.0 14.8902    
cufflinks 6.2575 0.0 18.4406    
cufflinks 2.30915 0.0 7.82456    
cufflinks 1.88351 0.0 6.51115    
cufflinks 6.29301 0.0 18.6171    
cufflinks 12.7769 0.0 34.9597    
cufflinks 0.550111 0.0 2.06038   Low
cufflinks 9.448     High  
cufflinks 0.008     Low Low
cufflinks 2.669        
cufflinks 0.076     Low  
cufflinks 0.078        
cufflinks 0.019     Low Low
cufflinks 19.586     High High
cufflinks 0.003     Low Low
cufflinks 3.633        
cufflinks 9.087     High  
cufflinks 27.344     High High
cufflinks 0.014     Low Low
cufflinks 24.723     High High
cufflinks 20.501     High High
cufflinks 0.014     Low Low
cufflinks 27.899     High High
cufflinks 0.051     Low  

0 Strain