Gene : Glyma.04G024900 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR12300:SF26 - HVA22-LIKE PROTEIN G-RELATED Genomic Order:  249
Name:  ? Glyma.04G024900 Secondary Identifier:  ? PAC:30490040
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G024900 0.5kb upstream 0.5kb upstream 3348 true Chr04: 1982576-1985923 Glycine max
Glyma.04G024900 0.5kb upstream 0.5kb upstream 500 false Chr04: 1985424-1985923 Glycine max
Glyma.04G024900 0.5kb downstream 0.5kb downstream 3348 true Chr04: 1982076-1985423 Glycine max
Glyma.04G024900 0.5kb downstream 0.5kb downstream 500 false Chr04: 1982076-1982575 Glycine max
Glyma.04G024900 1.0kb upstream 1.0kb upstream 3848 true Chr04: 1982576-1986423 Glycine max
Glyma.04G024900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 1985424-1986423 Glycine max
Glyma.04G024900 1.0kb downstream 1.0kb downstream 3848 true Chr04: 1981576-1985423 Glycine max
Glyma.04G024900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 1981576-1982575 Glycine max
Glyma.04G024900 2.0kb upstream 2.0kb upstream 4848 true Chr04: 1982576-1987423 Glycine max
Glyma.04G024900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 1985424-1987423 Glycine max
Glyma.04G024900 2.0kb downstream 2.0kb downstream 4848 true Chr04: 1980576-1985423 Glycine max
Glyma.04G024900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 1980576-1982575 Glycine max
Glyma.04G024900 5.0kb upstream 5.0kb upstream 7848 true Chr04: 1982576-1990423 Glycine max
Glyma.04G024900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 1985424-1990423 Glycine max
Glyma.04G024900 5.0kb downstream 5.0kb downstream 7848 true Chr04: 1977576-1985423 Glycine max
Glyma.04G024900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 1977576-1982575 Glycine max
Glyma.04G024900 10.0kb upstream 10.0kb upstream 12848 true Chr04: 1982576-1995423 Glycine max
Glyma.04G024900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 1985424-1995423 Glycine max
Glyma.04G024900 10.0kb downstream 10.0kb downstream 12848 true Chr04: 1972576-1985423 Glycine max
Glyma.04G024900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 1972576-1982575 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311541 5265 Fabidae View MSA
124068207 5270 Rosid View MSA
123753523 5271 Pentapetalae View MSA
122794920 5272 Eudicot View MSA
122050664 5273 Angiosperm View MSA
121348530 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.5017 0.0 5.24826   Low
cufflinks 2.34232 0.0 7.79437    
cufflinks 2.02805 0.0 6.86095    
cufflinks 1.78745 0.0 6.13354    
cufflinks 2.22425 0.0 7.45727    
cufflinks 7.09164 0.0 20.3174   High
cufflinks 2.27499 0.0 7.61504    
cufflinks 3.86891 0.0 11.991    
cufflinks 1.84818 0.0 6.32107    
cufflinks 0.513        
cufflinks 0.789        
cufflinks 0.92        
cufflinks 1.193        
cufflinks 0.902        
cufflinks 0.125       Low
cufflinks 0.808        
cufflinks 0.755        
cufflinks 1.057        
cufflinks 1.231        
cufflinks 0.973        
cufflinks 0.52        
cufflinks 0.912        
cufflinks 0.866        
cufflinks 1.073        
cufflinks 0.863        
cufflinks 0.553        

0 Strain