Gene : Glyma.19G147200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR33493:SF2 - LATE EMBRYOGENESIS ABUNDANT PROTEIN 4-5 Genomic Order:  1472
Name:  ? Glyma.19G147200 Secondary Identifier:  ? PAC:30513365
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G147200 0.5kb upstream 0.5kb upstream 1916 true Chr19: 40809155-40811070 Glycine max
Glyma.19G147200 0.5kb upstream 0.5kb upstream 500 false Chr19: 40810571-40811070 Glycine max
Glyma.19G147200 0.5kb downstream 0.5kb downstream 1916 true Chr19: 40808655-40810570 Glycine max
Glyma.19G147200 0.5kb downstream 0.5kb downstream 500 false Chr19: 40808655-40809154 Glycine max
Glyma.19G147200 1.0kb upstream 1.0kb upstream 2416 true Chr19: 40809155-40811570 Glycine max
Glyma.19G147200 1.0kb upstream 1.0kb upstream 1000 false Chr19: 40810571-40811570 Glycine max
Glyma.19G147200 1.0kb downstream 1.0kb downstream 2416 true Chr19: 40808155-40810570 Glycine max
Glyma.19G147200 1.0kb downstream 1.0kb downstream 1000 false Chr19: 40808155-40809154 Glycine max
Glyma.19G147200 2.0kb upstream 2.0kb upstream 3416 true Chr19: 40809155-40812570 Glycine max
Glyma.19G147200 2.0kb upstream 2.0kb upstream 2000 false Chr19: 40810571-40812570 Glycine max
Glyma.19G147200 2.0kb downstream 2.0kb downstream 3416 true Chr19: 40807155-40810570 Glycine max
Glyma.19G147200 2.0kb downstream 2.0kb downstream 2000 false Chr19: 40807155-40809154 Glycine max
Glyma.19G147200 5.0kb upstream 5.0kb upstream 6416 true Chr19: 40809155-40815570 Glycine max
Glyma.19G147200 5.0kb upstream 5.0kb upstream 5000 false Chr19: 40810571-40815570 Glycine max
Glyma.19G147200 5.0kb downstream 5.0kb downstream 6416 true Chr19: 40804155-40810570 Glycine max
Glyma.19G147200 5.0kb downstream 5.0kb downstream 5000 false Chr19: 40804155-40809154 Glycine max
Glyma.19G147200 10.0kb upstream 10.0kb upstream 11416 true Chr19: 40809155-40820570 Glycine max
Glyma.19G147200 10.0kb upstream 10.0kb upstream 10000 false Chr19: 40810571-40820570 Glycine max
Glyma.19G147200 10.0kb downstream 10.0kb downstream 11416 true Chr19: 40799155-40810570 Glycine max
Glyma.19G147200 10.0kb downstream 10.0kb downstream 10000 false Chr19: 40799155-40809154 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300333 5265 Fabidae View MSA
124073958 5270 Rosid View MSA
123749159 5271 Pentapetalae View MSA
122794913 5272 Eudicot View MSA
122046443 5273 Angiosperm View MSA
121349982 5274 Embryophyte View MSA
123381528 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0244248 0.0 0.110462 Low Low
cufflinks 3.16788 0.0 10.8191    
cufflinks 31.4485 0.0 84.0506 High High
cufflinks 0.273312 0.0 1.07079    
cufflinks 6.5243 0.0 19.8489    
cufflinks 21.3541 0.0 57.6903    
cufflinks 25.3776 0.0 68.0157 High High
cufflinks 0.77956 0.0 2.92071    
cufflinks 0.0494154 0.0 0.210602 Low Low
cufflinks 2.222        
cufflinks 0.576        
cufflinks 19.142     High High
cufflinks 0.477        
cufflinks 0.073       Low
cufflinks 0.013     Low Low
cufflinks 1.646        
cufflinks 1.887        
cufflinks 0.927        
cufflinks 0.746        
cufflinks 0.507        
cufflinks 1.25        
cufflinks 1.063        
cufflinks 0.517        
cufflinks 0.366        
cufflinks 1.109        
cufflinks 0.695        

0 Strain