Gene : Glyma.19G147400 G. max Wm82.a2.v1
Defline:  (1 of 2) 1.14.19.6 - Delta(12)-fatty-acid desaturase / Oleoyl-CoA Delta(12) desaturase Genomic Order:  1474
Name:  ? Glyma.19G147400 Secondary Identifier:  ? PAC:30514209
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5995 Glycine max pathologic  
Gmax PWY-762 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G147400 0.5kb upstream 0.5kb upstream 5465 true Chr19: 40819462-40824926 Glycine max
Glyma.19G147400 0.5kb upstream 0.5kb upstream 500 false Chr19: 40819462-40819961 Glycine max
Glyma.19G147400 0.5kb downstream 0.5kb downstream 5465 true Chr19: 40819962-40825426 Glycine max
Glyma.19G147400 0.5kb downstream 0.5kb downstream 500 false Chr19: 40824927-40825426 Glycine max
Glyma.19G147400 1.0kb upstream 1.0kb upstream 5965 true Chr19: 40818962-40824926 Glycine max
Glyma.19G147400 1.0kb upstream 1.0kb upstream 1000 false Chr19: 40818962-40819961 Glycine max
Glyma.19G147400 1.0kb downstream 1.0kb downstream 5965 true Chr19: 40819962-40825926 Glycine max
Glyma.19G147400 1.0kb downstream 1.0kb downstream 1000 false Chr19: 40824927-40825926 Glycine max
Glyma.19G147400 2.0kb upstream 2.0kb upstream 6965 true Chr19: 40817962-40824926 Glycine max
Glyma.19G147400 2.0kb upstream 2.0kb upstream 2000 false Chr19: 40817962-40819961 Glycine max
Glyma.19G147400 2.0kb downstream 2.0kb downstream 6965 true Chr19: 40819962-40826926 Glycine max
Glyma.19G147400 2.0kb downstream 2.0kb downstream 2000 false Chr19: 40824927-40826926 Glycine max
Glyma.19G147400 5.0kb upstream 5.0kb upstream 9965 true Chr19: 40814962-40824926 Glycine max
Glyma.19G147400 5.0kb upstream 5.0kb upstream 5000 false Chr19: 40814962-40819961 Glycine max
Glyma.19G147400 5.0kb downstream 5.0kb downstream 9965 true Chr19: 40819962-40829926 Glycine max
Glyma.19G147400 5.0kb downstream 5.0kb downstream 5000 false Chr19: 40824927-40829926 Glycine max
Glyma.19G147400 10.0kb upstream 10.0kb upstream 14965 true Chr19: 40809962-40824926 Glycine max
Glyma.19G147400 10.0kb upstream 10.0kb upstream 10000 false Chr19: 40809962-40819961 Glycine max
Glyma.19G147400 10.0kb downstream 10.0kb downstream 14965 true Chr19: 40819962-40834926 Glycine max
Glyma.19G147400 10.0kb downstream 10.0kb downstream 10000 false Chr19: 40824927-40834926 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041215 5273 Angiosperm View MSA
122299499 5265 Fabidae View MSA
124074119 5270 Rosid View MSA
123747966 5271 Pentapetalae View MSA
122789327 5272 Eudicot View MSA
121347269 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 66.9787 0.0 262.746 High  
cufflinks 260.85 0.0 1567.22 High High
cufflinks 83.1113 0.0 348.612 High  
cufflinks 243.028 0.0 1402.11 High High
cufflinks 163.817 0.0 766.47 High  
cufflinks 67.2586 0.0 265.52 High  
cufflinks 103.62 0.0 403.432 High  
cufflinks 57.4359 0.0 217.318 High Low
cufflinks 138.822 0.0 602.792 High  
cufflinks 27.673     High  
cufflinks 1.415       Low
cufflinks 27.282     High  
cufflinks 17.247     High  
cufflinks 24.141     High  
cufflinks 11.985     High  
cufflinks 35.151     High  
cufflinks 3.285       Low
cufflinks 48.437     High  
cufflinks 45.517     High  
cufflinks 31.909     High  
cufflinks 1.892       Low
cufflinks 40.019     High  
cufflinks 49.226     High  
cufflinks 2.878       Low
cufflinks 29.743     High  
cufflinks 4.728        

0 Strain