Gene : Glyma.04G028900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR13878:SF60 - CYTOKININ DEHYDROGENASE 5 Genomic Order:  289
Name:  ? Glyma.04G028900 Secondary Identifier:  ? PAC:30487574
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G028900 0.5kb upstream 0.5kb upstream 7530 true Chr04: 2346113-2353642 Glycine max
Glyma.04G028900 0.5kb upstream 0.5kb upstream 500 false Chr04: 2346113-2346612 Glycine max
Glyma.04G028900 0.5kb downstream 0.5kb downstream 7530 true Chr04: 2346613-2354142 Glycine max
Glyma.04G028900 0.5kb downstream 0.5kb downstream 500 false Chr04: 2353643-2354142 Glycine max
Glyma.04G028900 1.0kb upstream 1.0kb upstream 8030 true Chr04: 2345613-2353642 Glycine max
Glyma.04G028900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 2345613-2346612 Glycine max
Glyma.04G028900 1.0kb downstream 1.0kb downstream 8030 true Chr04: 2346613-2354642 Glycine max
Glyma.04G028900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 2353643-2354642 Glycine max
Glyma.04G028900 2.0kb upstream 2.0kb upstream 9030 true Chr04: 2344613-2353642 Glycine max
Glyma.04G028900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 2344613-2346612 Glycine max
Glyma.04G028900 2.0kb downstream 2.0kb downstream 9030 true Chr04: 2346613-2355642 Glycine max
Glyma.04G028900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 2353643-2355642 Glycine max
Glyma.04G028900 5.0kb upstream 5.0kb upstream 12030 true Chr04: 2341613-2353642 Glycine max
Glyma.04G028900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 2341613-2346612 Glycine max
Glyma.04G028900 5.0kb downstream 5.0kb downstream 12030 true Chr04: 2346613-2358642 Glycine max
Glyma.04G028900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 2353643-2358642 Glycine max
Glyma.04G028900 10.0kb upstream 10.0kb upstream 17030 true Chr04: 2336613-2353642 Glycine max
Glyma.04G028900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 2336613-2346612 Glycine max
Glyma.04G028900 10.0kb downstream 10.0kb downstream 17030 true Chr04: 2346613-2363642 Glycine max
Glyma.04G028900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 2353643-2363642 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304076 5265 Fabidae View MSA
124065162 5270 Rosid View MSA
123739641 5271 Pentapetalae View MSA
122791542 5272 Eudicot View MSA
122043536 5273 Angiosperm View MSA
121348628 5274 Embryophyte View MSA
123380946 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0154104 0.0 0.37323 Low Low
cufflinks 0.232415 0.0 1.96 Low  
cufflinks 0.218355 0.0 1.63507    
cufflinks 0.0412605 0.0 0.647431 Low  
cufflinks 0.195977 0.0 1.50842 Low  
cufflinks 0.0244272 0.0 0.381262 Low Low
cufflinks 0.109068 0.0 0.977167 Low  
cufflinks 0.0702989 0.0 0.816509 Low  
cufflinks 0.335714 0.0 1.99092   High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.171       High
cufflinks 0.03     Low  
cufflinks 0.049     Low  
cufflinks 0.011     Low  
cufflinks 0.005     Low  
cufflinks 0.019     Low  
cufflinks 0.394       High
cufflinks 0.08     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low Low
cufflinks 0.003     Low Low
cufflinks 0.003     Low Low
cufflinks 0.005     Low  
cufflinks 0.032     Low  

0 Strain