Gene : Glyma.04G027400 G. max Wm82.a2.v1
Defline:  (1 of 21) PF05142 - Domain of unknown function (DUF702) (DUF702) Genomic Order:  274
Name:  ? Glyma.04G027400 Secondary Identifier:  ? PAC:30488267
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G027400 0.5kb upstream 0.5kb upstream 3237 true Chr04: 2234641-2237877 Glycine max
Glyma.04G027400 0.5kb upstream 0.5kb upstream 500 false Chr04: 2234641-2235140 Glycine max
Glyma.04G027400 0.5kb downstream 0.5kb downstream 3237 true Chr04: 2235141-2238377 Glycine max
Glyma.04G027400 0.5kb downstream 0.5kb downstream 500 false Chr04: 2237878-2238377 Glycine max
Glyma.04G027400 1.0kb upstream 1.0kb upstream 3737 true Chr04: 2234141-2237877 Glycine max
Glyma.04G027400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 2234141-2235140 Glycine max
Glyma.04G027400 1.0kb downstream 1.0kb downstream 3737 true Chr04: 2235141-2238877 Glycine max
Glyma.04G027400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 2237878-2238877 Glycine max
Glyma.04G027400 2.0kb upstream 2.0kb upstream 4737 true Chr04: 2233141-2237877 Glycine max
Glyma.04G027400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 2233141-2235140 Glycine max
Glyma.04G027400 2.0kb downstream 2.0kb downstream 4737 true Chr04: 2235141-2239877 Glycine max
Glyma.04G027400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 2237878-2239877 Glycine max
Glyma.04G027400 5.0kb upstream 5.0kb upstream 7737 true Chr04: 2230141-2237877 Glycine max
Glyma.04G027400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 2230141-2235140 Glycine max
Glyma.04G027400 5.0kb downstream 5.0kb downstream 7737 true Chr04: 2235141-2242877 Glycine max
Glyma.04G027400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 2237878-2242877 Glycine max
Glyma.04G027400 10.0kb upstream 10.0kb upstream 12737 true Chr04: 2225141-2237877 Glycine max
Glyma.04G027400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 2225141-2235140 Glycine max
Glyma.04G027400 10.0kb downstream 10.0kb downstream 12737 true Chr04: 2235141-2247877 Glycine max
Glyma.04G027400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 2237878-2247877 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311676 5265 Fabidae View MSA
124067577 5270 Rosid View MSA
123749314 5271 Pentapetalae View MSA
122796752 5272 Eudicot View MSA
122049669 5273 Angiosperm View MSA
121344202 5274 Embryophyte View MSA
123379999 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0282474 0.0 0.11692 Low Low
cufflinks 0.886982 0.0 3.10209    
cufflinks 1.10735 0.0 3.78746    
cufflinks 0.117678 0.0 0.458583 Low  
cufflinks 0.947185 0.0 3.28976    
cufflinks 0.594975 0.0 2.14241    
cufflinks 0.0910684 0.0 0.358389 Low Low
cufflinks 0.786308 0.0 2.77544    
cufflinks 1.71378 0.0 5.55109   High
cufflinks 0.111        
cufflinks 0.102        
cufflinks 1.983       High
cufflinks 0.025     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.166        
cufflinks 0.096     Low  
cufflinks 3.443       High
cufflinks 2.709       High
cufflinks 0.875        
cufflinks 0.073     Low  
cufflinks 0.407        
cufflinks 0.065     Low  
cufflinks 0.084     Low  
cufflinks 0.247        
cufflinks 0.067     Low  
cufflinks 0.199        

0 Strain