Gene : Glyma.04G194800 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR10891//PTHR10891:SF621 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN Genomic Order:  1948
Name:  ? Glyma.04G194800 Secondary Identifier:  ? PAC:30488339
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G194800 0.5kb upstream 0.5kb upstream 1976 true Chr04: 46661284-46663259 Glycine max
Glyma.04G194800 0.5kb upstream 0.5kb upstream 500 false Chr04: 46661284-46661783 Glycine max
Glyma.04G194800 0.5kb downstream 0.5kb downstream 1976 true Chr04: 46661784-46663759 Glycine max
Glyma.04G194800 0.5kb downstream 0.5kb downstream 500 false Chr04: 46663260-46663759 Glycine max
Glyma.04G194800 1.0kb upstream 1.0kb upstream 2476 true Chr04: 46660784-46663259 Glycine max
Glyma.04G194800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 46660784-46661783 Glycine max
Glyma.04G194800 1.0kb downstream 1.0kb downstream 2476 true Chr04: 46661784-46664259 Glycine max
Glyma.04G194800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 46663260-46664259 Glycine max
Glyma.04G194800 2.0kb upstream 2.0kb upstream 3476 true Chr04: 46659784-46663259 Glycine max
Glyma.04G194800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 46659784-46661783 Glycine max
Glyma.04G194800 2.0kb downstream 2.0kb downstream 3476 true Chr04: 46661784-46665259 Glycine max
Glyma.04G194800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 46663260-46665259 Glycine max
Glyma.04G194800 5.0kb upstream 5.0kb upstream 6476 true Chr04: 46656784-46663259 Glycine max
Glyma.04G194800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 46656784-46661783 Glycine max
Glyma.04G194800 5.0kb downstream 5.0kb downstream 6476 true Chr04: 46661784-46668259 Glycine max
Glyma.04G194800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 46663260-46668259 Glycine max
Glyma.04G194800 10.0kb upstream 10.0kb upstream 11476 true Chr04: 46651784-46663259 Glycine max
Glyma.04G194800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 46651784-46661783 Glycine max
Glyma.04G194800 10.0kb downstream 10.0kb downstream 11476 true Chr04: 46661784-46673259 Glycine max
Glyma.04G194800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 46663260-46673259 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309759 5265 Fabidae View MSA
124071613 5270 Rosid View MSA
123747964 5271 Pentapetalae View MSA
122795822 5272 Eudicot View MSA
122046502 5273 Angiosperm View MSA
121351910 5274 Embryophyte View MSA
123382405 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.80486 0.0 9.18384    
cufflinks 7.70673 0.0 21.91    
cufflinks 7.07418 0.0 20.2258    
cufflinks 0.246721 0.0 0.953602   Low
cufflinks 2.30201 0.0 7.74705    
cufflinks 42.4554 0.0 115.231 High High
cufflinks 0.250144 0.0 0.96784   Low
cufflinks 1.65054 0.0 5.73142    
cufflinks 2.25443 0.0 7.57252    
cufflinks 9.73     High  
cufflinks 85.03     High High
cufflinks 10.574     High  
cufflinks 13.603     High  
cufflinks 1.373       Low
cufflinks 15.454     High  
cufflinks 12.932     High  
cufflinks 82.181     High High
cufflinks 3.822       Low
cufflinks 10.797     High  
cufflinks 8.562     High  
cufflinks 19.543     High  
cufflinks 9.575     High  
cufflinks 10.002     High  
cufflinks 75.62     High High
cufflinks 10.421     High  
cufflinks 38.825     High  

0 Strain