Gene : Glyma.04G194000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR15840 - CGI-121 FAMILY MEMBER Genomic Order:  1940
Name:  ? Glyma.04G194000 Secondary Identifier:  ? PAC:30488447
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G194000 0.5kb upstream 0.5kb upstream 3726 true Chr04: 46567685-46571410 Glycine max
Glyma.04G194000 0.5kb upstream 0.5kb upstream 500 false Chr04: 46570911-46571410 Glycine max
Glyma.04G194000 0.5kb downstream 0.5kb downstream 3726 true Chr04: 46567185-46570910 Glycine max
Glyma.04G194000 0.5kb downstream 0.5kb downstream 500 false Chr04: 46567185-46567684 Glycine max
Glyma.04G194000 1.0kb upstream 1.0kb upstream 4226 true Chr04: 46567685-46571910 Glycine max
Glyma.04G194000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 46570911-46571910 Glycine max
Glyma.04G194000 1.0kb downstream 1.0kb downstream 4226 true Chr04: 46566685-46570910 Glycine max
Glyma.04G194000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 46566685-46567684 Glycine max
Glyma.04G194000 2.0kb upstream 2.0kb upstream 5226 true Chr04: 46567685-46572910 Glycine max
Glyma.04G194000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 46570911-46572910 Glycine max
Glyma.04G194000 2.0kb downstream 2.0kb downstream 5226 true Chr04: 46565685-46570910 Glycine max
Glyma.04G194000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 46565685-46567684 Glycine max
Glyma.04G194000 5.0kb upstream 5.0kb upstream 8226 true Chr04: 46567685-46575910 Glycine max
Glyma.04G194000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 46570911-46575910 Glycine max
Glyma.04G194000 5.0kb downstream 5.0kb downstream 8226 true Chr04: 46562685-46570910 Glycine max
Glyma.04G194000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 46562685-46567684 Glycine max
Glyma.04G194000 10.0kb upstream 10.0kb upstream 13226 true Chr04: 46567685-46580910 Glycine max
Glyma.04G194000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 46570911-46580910 Glycine max
Glyma.04G194000 10.0kb downstream 10.0kb downstream 13226 true Chr04: 46557685-46570910 Glycine max
Glyma.04G194000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 46557685-46567684 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026161 5273 Angiosperm View MSA
122307041 5265 Fabidae View MSA
124060531 5270 Rosid View MSA
123741056 5271 Pentapetalae View MSA
122787559 5272 Eudicot View MSA
121345637 5274 Embryophyte View MSA
123425208 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.1762 0.0 47.1535   Low
cufflinks 24.5422 0.0 65.926 High  
cufflinks 14.7118 0.0 40.6922   Low
cufflinks 26.6371 0.0 71.3462 High  
cufflinks 25.6286 0.0 68.7999 High  
cufflinks 25.5841 0.0 68.6703 High  
cufflinks 43.5544 0.0 116.359 High High
cufflinks 19.8631 0.0 53.8774    
cufflinks 28.2719 0.0 75.6276 High  
cufflinks 3.564        
cufflinks 3.207        
cufflinks 4.262        
cufflinks 4.83        
cufflinks 6.198       High
cufflinks 4.693        
cufflinks 4.15        
cufflinks 2.839       Low
cufflinks 6.811       High
cufflinks 4.13        
cufflinks 3.657        
cufflinks 2.91       Low
cufflinks 3.615        
cufflinks 3.486        
cufflinks 3.049        
cufflinks 4.201        
cufflinks 2.796       Low

0 Strain