Gene : Glyma.04G188700 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR23115//PTHR23115:SF146 - TRANSLATION FACTOR Genomic Order:  1887
Name:  ? Glyma.04G188700 Secondary Identifier:  ? PAC:30488580
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G188700 0.5kb upstream 0.5kb upstream 2579 true Chr04: 45946433-45949011 Glycine max
Glyma.04G188700 0.5kb upstream 0.5kb upstream 500 false Chr04: 45948512-45949011 Glycine max
Glyma.04G188700 0.5kb downstream 0.5kb downstream 2579 true Chr04: 45945933-45948511 Glycine max
Glyma.04G188700 0.5kb downstream 0.5kb downstream 500 false Chr04: 45945933-45946432 Glycine max
Glyma.04G188700 1.0kb upstream 1.0kb upstream 3079 true Chr04: 45946433-45949511 Glycine max
Glyma.04G188700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 45948512-45949511 Glycine max
Glyma.04G188700 1.0kb downstream 1.0kb downstream 3079 true Chr04: 45945433-45948511 Glycine max
Glyma.04G188700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 45945433-45946432 Glycine max
Glyma.04G188700 2.0kb upstream 2.0kb upstream 4079 true Chr04: 45946433-45950511 Glycine max
Glyma.04G188700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 45948512-45950511 Glycine max
Glyma.04G188700 2.0kb downstream 2.0kb downstream 4079 true Chr04: 45944433-45948511 Glycine max
Glyma.04G188700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 45944433-45946432 Glycine max
Glyma.04G188700 5.0kb upstream 5.0kb upstream 7079 true Chr04: 45946433-45953511 Glycine max
Glyma.04G188700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 45948512-45953511 Glycine max
Glyma.04G188700 5.0kb downstream 5.0kb downstream 7079 true Chr04: 45941433-45948511 Glycine max
Glyma.04G188700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 45941433-45946432 Glycine max
Glyma.04G188700 10.0kb upstream 10.0kb upstream 12079 true Chr04: 45946433-45958511 Glycine max
Glyma.04G188700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 45948512-45958511 Glycine max
Glyma.04G188700 10.0kb downstream 10.0kb downstream 12079 true Chr04: 45936433-45948511 Glycine max
Glyma.04G188700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 45936433-45946432 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307282 5265 Fabidae View MSA
124072746 5270 Rosid View MSA
123742127 5271 Pentapetalae View MSA
122793588 5272 Eudicot View MSA
122044258 5273 Angiosperm View MSA
121344643 5274 Embryophyte View MSA
123380078 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 165.074 0.0 578.804 High High
cufflinks 39.2886 0.0 108.15 High  
cufflinks 10.3382 0.0 28.1441    
cufflinks 27.7144 0.0 74.611 High  
cufflinks 6.43 0.0 17.9289    
cufflinks 2.58613 0.0 8.15541   Low
cufflinks 14.3909 0.0 38.4474    
cufflinks 20.5446 0.0 54.8724    
cufflinks 1.67383 0.0 5.60744   Low
cufflinks 15.442     High  
cufflinks 0.038     Low Low
cufflinks 8.815     High  
cufflinks 0.388        
cufflinks 0.257        
cufflinks 0.226        
cufflinks 89.469     High High
cufflinks 0.129        
cufflinks 9.254     High  
cufflinks 31.341     High  
cufflinks 79.008     High High
cufflinks 0.04     Low Low
cufflinks 73.148     High High
cufflinks 69.019     High High
cufflinks 0.019     Low Low
cufflinks 84.8     High High
cufflinks 0.082       Low

0 Strain