Gene : Glyma.19G137300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31879:SF2 - DET1- AND DDB1-ASSOCIATED PROTEIN 1 Genomic Order:  1373
Name:  ? Glyma.19G137300 Secondary Identifier:  ? PAC:30512394
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G137300 0.5kb upstream 0.5kb upstream 3651 true Chr19: 39855613-39859263 Glycine max
Glyma.19G137300 0.5kb upstream 0.5kb upstream 500 false Chr19: 39855613-39856112 Glycine max
Glyma.19G137300 0.5kb downstream 0.5kb downstream 3651 true Chr19: 39856113-39859763 Glycine max
Glyma.19G137300 0.5kb downstream 0.5kb downstream 500 false Chr19: 39859264-39859763 Glycine max
Glyma.19G137300 1.0kb upstream 1.0kb upstream 4151 true Chr19: 39855113-39859263 Glycine max
Glyma.19G137300 1.0kb upstream 1.0kb upstream 1000 false Chr19: 39855113-39856112 Glycine max
Glyma.19G137300 1.0kb downstream 1.0kb downstream 4151 true Chr19: 39856113-39860263 Glycine max
Glyma.19G137300 1.0kb downstream 1.0kb downstream 1000 false Chr19: 39859264-39860263 Glycine max
Glyma.19G137300 2.0kb upstream 2.0kb upstream 5151 true Chr19: 39854113-39859263 Glycine max
Glyma.19G137300 2.0kb upstream 2.0kb upstream 2000 false Chr19: 39854113-39856112 Glycine max
Glyma.19G137300 2.0kb downstream 2.0kb downstream 5151 true Chr19: 39856113-39861263 Glycine max
Glyma.19G137300 2.0kb downstream 2.0kb downstream 2000 false Chr19: 39859264-39861263 Glycine max
Glyma.19G137300 5.0kb upstream 5.0kb upstream 8151 true Chr19: 39851113-39859263 Glycine max
Glyma.19G137300 5.0kb upstream 5.0kb upstream 5000 false Chr19: 39851113-39856112 Glycine max
Glyma.19G137300 5.0kb downstream 5.0kb downstream 8151 true Chr19: 39856113-39864263 Glycine max
Glyma.19G137300 5.0kb downstream 5.0kb downstream 5000 false Chr19: 39859264-39864263 Glycine max
Glyma.19G137300 10.0kb upstream 10.0kb upstream 13151 true Chr19: 39846113-39859263 Glycine max
Glyma.19G137300 10.0kb upstream 10.0kb upstream 10000 false Chr19: 39846113-39856112 Glycine max
Glyma.19G137300 10.0kb downstream 10.0kb downstream 13151 true Chr19: 39856113-39869263 Glycine max
Glyma.19G137300 10.0kb downstream 10.0kb downstream 10000 false Chr19: 39859264-39869263 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309199 5265 Fabidae View MSA
124063668 5270 Rosid View MSA
123750714 5271 Pentapetalae View MSA
122790352 5272 Eudicot View MSA
122042926 5273 Angiosperm View MSA
121310044 5274 Embryophyte View MSA
123347643 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.56255 0.0 17.2775    
cufflinks 6.87185 0.0 26.8608    
cufflinks 5.60626 0.0 23.0855    
cufflinks 13.5503 0.0 44.0397   High
cufflinks 3.14052 0.0 15.7781    
cufflinks 1.16446 0.0 7.0138   Low
cufflinks 9.11865 0.0 32.8235    
cufflinks 9.29078 0.0 32.9003    
cufflinks 3.73122 0.0 17.8369    
cufflinks 1.311        
cufflinks 0.213       Low
cufflinks 1.512        
cufflinks 0.544        
cufflinks 0.681        
cufflinks 0.848        
cufflinks 1.075        
cufflinks 0.292       Low
cufflinks 2.656       High
cufflinks 1.078        
cufflinks 1.245        
cufflinks 0.336        
cufflinks 1.219        
cufflinks 1.284        
cufflinks 0.245       Low
cufflinks 1.204        
cufflinks 0.208       Low

0 Strain