Gene : Glyma.04G187500 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11721 - 60S RIBOSOMAL PROTEIN L27A Genomic Order:  1875
Name:  ? Glyma.04G187500 Secondary Identifier:  ? PAC:30488616
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G187500 0.5kb upstream 0.5kb upstream 1710 true Chr04: 45829201-45830910 Glycine max
Glyma.04G187500 0.5kb upstream 0.5kb upstream 500 false Chr04: 45830411-45830910 Glycine max
Glyma.04G187500 0.5kb downstream 0.5kb downstream 1710 true Chr04: 45828701-45830410 Glycine max
Glyma.04G187500 0.5kb downstream 0.5kb downstream 500 false Chr04: 45828701-45829200 Glycine max
Glyma.04G187500 1.0kb upstream 1.0kb upstream 2210 true Chr04: 45829201-45831410 Glycine max
Glyma.04G187500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 45830411-45831410 Glycine max
Glyma.04G187500 1.0kb downstream 1.0kb downstream 2210 true Chr04: 45828201-45830410 Glycine max
Glyma.04G187500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 45828201-45829200 Glycine max
Glyma.04G187500 2.0kb upstream 2.0kb upstream 3210 true Chr04: 45829201-45832410 Glycine max
Glyma.04G187500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 45830411-45832410 Glycine max
Glyma.04G187500 2.0kb downstream 2.0kb downstream 3210 true Chr04: 45827201-45830410 Glycine max
Glyma.04G187500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 45827201-45829200 Glycine max
Glyma.04G187500 5.0kb upstream 5.0kb upstream 6210 true Chr04: 45829201-45835410 Glycine max
Glyma.04G187500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 45830411-45835410 Glycine max
Glyma.04G187500 5.0kb downstream 5.0kb downstream 6210 true Chr04: 45824201-45830410 Glycine max
Glyma.04G187500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 45824201-45829200 Glycine max
Glyma.04G187500 10.0kb upstream 10.0kb upstream 11210 true Chr04: 45829201-45840410 Glycine max
Glyma.04G187500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 45830411-45840410 Glycine max
Glyma.04G187500 10.0kb downstream 10.0kb downstream 11210 true Chr04: 45819201-45830410 Glycine max
Glyma.04G187500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 45819201-45829200 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313836 5265 Fabidae View MSA
124061356 5270 Rosid View MSA
123746209 5271 Pentapetalae View MSA
122794134 5272 Eudicot View MSA
122049114 5273 Angiosperm View MSA
121346652 5274 Embryophyte View MSA
123426087 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.4445 0.0 119.805 High  
cufflinks 77.7317 0.0 218.713 High  
cufflinks 26.2707 0.0 70.1341 High Low
cufflinks 35.2456 0.0 94.2657 High Low
cufflinks 140.886 0.0 434.299 High High
cufflinks 75.4809 0.0 212.276 High  
cufflinks 102.226 0.0 298.943 High  
cufflinks 64.4623 0.0 178.046 High  
cufflinks 70.2659 0.0 196.087 High  
cufflinks 41.3     High  
cufflinks 10.109     High Low
cufflinks 28.585     High  
cufflinks 122.155     High High
cufflinks 179.765     High High
cufflinks 8.183     High Low
cufflinks 38.761     High  
cufflinks 25.72     High  
cufflinks 32.251     High  
cufflinks 62.859     High  
cufflinks 21.458     High  
cufflinks 17.155     High  
cufflinks 25.096     High  
cufflinks 49.072     High  
cufflinks 14.505     High  
cufflinks 26.642     High  
cufflinks 28.971     High  

0 Strain