Gene : Glyma.04G206000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10972:SF100 - OXYSTEROL-BINDING PROTEIN HOMOLOG 3 Genomic Order:  2060
Name:  ? Glyma.04G206000 Secondary Identifier:  ? PAC:30487907
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G206000 0.5kb upstream 0.5kb upstream 9156 true Chr04: 47855738-47864893 Glycine max
Glyma.04G206000 0.5kb upstream 0.5kb upstream 500 false Chr04: 47855738-47856237 Glycine max
Glyma.04G206000 0.5kb downstream 0.5kb downstream 9156 true Chr04: 47856238-47865393 Glycine max
Glyma.04G206000 0.5kb downstream 0.5kb downstream 500 false Chr04: 47864894-47865393 Glycine max
Glyma.04G206000 1.0kb upstream 1.0kb upstream 9656 true Chr04: 47855238-47864893 Glycine max
Glyma.04G206000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 47855238-47856237 Glycine max
Glyma.04G206000 1.0kb downstream 1.0kb downstream 9656 true Chr04: 47856238-47865893 Glycine max
Glyma.04G206000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 47864894-47865893 Glycine max
Glyma.04G206000 2.0kb upstream 2.0kb upstream 10656 true Chr04: 47854238-47864893 Glycine max
Glyma.04G206000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 47854238-47856237 Glycine max
Glyma.04G206000 2.0kb downstream 2.0kb downstream 10656 true Chr04: 47856238-47866893 Glycine max
Glyma.04G206000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 47864894-47866893 Glycine max
Glyma.04G206000 5.0kb upstream 5.0kb upstream 13656 true Chr04: 47851238-47864893 Glycine max
Glyma.04G206000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 47851238-47856237 Glycine max
Glyma.04G206000 5.0kb downstream 5.0kb downstream 13656 true Chr04: 47856238-47869893 Glycine max
Glyma.04G206000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 47864894-47869893 Glycine max
Glyma.04G206000 10.0kb upstream 10.0kb upstream 18656 true Chr04: 47846238-47864893 Glycine max
Glyma.04G206000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 47846238-47856237 Glycine max
Glyma.04G206000 10.0kb downstream 10.0kb downstream 18656 true Chr04: 47856238-47874893 Glycine max
Glyma.04G206000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 47864894-47874893 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041393 5273 Angiosperm View MSA
122297387 5265 Fabidae View MSA
124036009 5270 Rosid View MSA
123750665 5271 Pentapetalae View MSA
122795598 5272 Eudicot View MSA
121348669 5274 Embryophyte View MSA
123428535 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0807118 0.0 0.315045 Low  
cufflinks 0.126368 0.0 0.484289 Low  
cufflinks 0.544479 0.0 1.92714   High
cufflinks 0.0294297 0.0 0.119408 Low Low
cufflinks 0.0561894 0.0 0.222128 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0874981 0.0 0.340324 Low  
cufflinks 0.0332528 0.0 0.134144 Low Low
cufflinks 0.0939304 0.0 0.364393 Low  
cufflinks 0.003     Low Low
cufflinks 0.024     Low  
cufflinks 0.13       High
cufflinks 0.002     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.083     Low  
cufflinks 0.031     Low  
cufflinks 0.383       High
cufflinks 0.045     Low  
cufflinks 0.099        
cufflinks 0.009     Low  
cufflinks 0.056     Low  
cufflinks 0.069     Low  
cufflinks 0.018     Low  
cufflinks 0.079     Low  
cufflinks 0.007     Low  

0 Strain