Gene : Glyma.04G201900 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  2019
Name:  ? Glyma.04G201900 Secondary Identifier:  ? PAC:30488428
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G201900 0.5kb upstream 0.5kb upstream 3128 true Chr04: 47468917-47472044 Glycine max
Glyma.04G201900 0.5kb upstream 0.5kb upstream 500 false Chr04: 47468917-47469416 Glycine max
Glyma.04G201900 0.5kb downstream 0.5kb downstream 3128 true Chr04: 47469417-47472544 Glycine max
Glyma.04G201900 0.5kb downstream 0.5kb downstream 500 false Chr04: 47472045-47472544 Glycine max
Glyma.04G201900 1.0kb upstream 1.0kb upstream 3628 true Chr04: 47468417-47472044 Glycine max
Glyma.04G201900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 47468417-47469416 Glycine max
Glyma.04G201900 1.0kb downstream 1.0kb downstream 3628 true Chr04: 47469417-47473044 Glycine max
Glyma.04G201900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 47472045-47473044 Glycine max
Glyma.04G201900 2.0kb upstream 2.0kb upstream 4628 true Chr04: 47467417-47472044 Glycine max
Glyma.04G201900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 47467417-47469416 Glycine max
Glyma.04G201900 2.0kb downstream 2.0kb downstream 4628 true Chr04: 47469417-47474044 Glycine max
Glyma.04G201900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 47472045-47474044 Glycine max
Glyma.04G201900 5.0kb upstream 5.0kb upstream 7628 true Chr04: 47464417-47472044 Glycine max
Glyma.04G201900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 47464417-47469416 Glycine max
Glyma.04G201900 5.0kb downstream 5.0kb downstream 7628 true Chr04: 47469417-47477044 Glycine max
Glyma.04G201900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 47472045-47477044 Glycine max
Glyma.04G201900 10.0kb upstream 10.0kb upstream 12628 true Chr04: 47459417-47472044 Glycine max
Glyma.04G201900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 47459417-47469416 Glycine max
Glyma.04G201900 10.0kb downstream 10.0kb downstream 12628 true Chr04: 47469417-47482044 Glycine max
Glyma.04G201900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 47472045-47482044 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311790 5265 Fabidae View MSA
124066336 5270 Rosid View MSA
123738073 5271 Pentapetalae View MSA
122789741 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.75903 0.0 11.8219   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.134079 0.0 0.530598 Low  
cufflinks 0.00889144 0.0 0.0427503 Low Low
cufflinks 0.0573561 0.0 0.235687 Low  
cufflinks 0.473531 0.0 1.78195    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.04849 0.0 0.200809 Low  
cufflinks 0.13389 0.0 0.530418 Low  
cufflinks 0.066     Low  
cufflinks 0.223       High
cufflinks 0.137        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.1        
cufflinks 0.007     Low Low
cufflinks 0.033     Low  
cufflinks 0.008     Low Low
cufflinks 0.076     Low  
cufflinks 0.014     Low  
cufflinks 0.391       High
cufflinks 0.015     Low  
cufflinks 0.087     Low  
cufflinks 0.457       High
cufflinks 0.007     Low Low
cufflinks 0.138        

0 Strain