Gene : Glyma.04G201200 G. max Wm82.a2.v1
Defline:  (1 of 10) KOG4660 - Protein Mei2, essential for commitment to meiosis, and related proteins Genomic Order:  2012
Name:  ? Glyma.04G201200 Secondary Identifier:  ? PAC:30488902
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G201200 0.5kb upstream 0.5kb upstream 9210 true Chr04: 47402586-47411795 Glycine max
Glyma.04G201200 0.5kb upstream 0.5kb upstream 500 false Chr04: 47402586-47403085 Glycine max
Glyma.04G201200 0.5kb downstream 0.5kb downstream 9210 true Chr04: 47403086-47412295 Glycine max
Glyma.04G201200 0.5kb downstream 0.5kb downstream 500 false Chr04: 47411796-47412295 Glycine max
Glyma.04G201200 1.0kb upstream 1.0kb upstream 9710 true Chr04: 47402086-47411795 Glycine max
Glyma.04G201200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 47402086-47403085 Glycine max
Glyma.04G201200 1.0kb downstream 1.0kb downstream 9710 true Chr04: 47403086-47412795 Glycine max
Glyma.04G201200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 47411796-47412795 Glycine max
Glyma.04G201200 2.0kb upstream 2.0kb upstream 10710 true Chr04: 47401086-47411795 Glycine max
Glyma.04G201200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 47401086-47403085 Glycine max
Glyma.04G201200 2.0kb downstream 2.0kb downstream 10710 true Chr04: 47403086-47413795 Glycine max
Glyma.04G201200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 47411796-47413795 Glycine max
Glyma.04G201200 5.0kb upstream 5.0kb upstream 13710 true Chr04: 47398086-47411795 Glycine max
Glyma.04G201200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 47398086-47403085 Glycine max
Glyma.04G201200 5.0kb downstream 5.0kb downstream 13710 true Chr04: 47403086-47416795 Glycine max
Glyma.04G201200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 47411796-47416795 Glycine max
Glyma.04G201200 10.0kb upstream 10.0kb upstream 18710 true Chr04: 47393086-47411795 Glycine max
Glyma.04G201200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 47393086-47403085 Glycine max
Glyma.04G201200 10.0kb downstream 10.0kb downstream 18710 true Chr04: 47403086-47421795 Glycine max
Glyma.04G201200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 47411796-47421795 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027327 5273 Angiosperm View MSA
122315120 5265 Fabidae View MSA
124072187 5270 Rosid View MSA
123739010 5271 Pentapetalae View MSA
122788517 5272 Eudicot View MSA
121349156 5274 Embryophyte View MSA
123428382 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.13628 0.0 12.8592   Low
cufflinks 13.3908 0.0 41.3718    
cufflinks 18.4657 0.0 60.3298   High
cufflinks 13.4363 0.0 41.7552    
cufflinks 9.86446 0.0 29.8036    
cufflinks 5.70243 0.0 17.8057   Low
cufflinks 15.4734 0.0 48.4551    
cufflinks 7.56971 0.0 23.0396    
cufflinks 7.64901 0.0 22.7169    
cufflinks 3.053        
cufflinks 1.54        
cufflinks 3.789        
cufflinks 2.319        
cufflinks 2.186        
cufflinks 1.321       Low
cufflinks 3.646        
cufflinks 1.19       Low
cufflinks 6.363       High
cufflinks 5.757       High
cufflinks 4.305        
cufflinks 1.604        
cufflinks 4.532        
cufflinks 3.574        
cufflinks 2.033        
cufflinks 4.578        
cufflinks 1.05       Low

0 Strain