Gene : Glyma.04G221900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23355:SF35 - EXOSOME COMPLEX EXONUCLEASE RRP44 Genomic Order:  2219
Name:  ? Glyma.04G221900 Secondary Identifier:  ? PAC:30487930
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G221900 0.5kb upstream 0.5kb upstream 15637 true Chr04: 49252774-49268410 Glycine max
Glyma.04G221900 0.5kb upstream 0.5kb upstream 500 false Chr04: 49267911-49268410 Glycine max
Glyma.04G221900 0.5kb downstream 0.5kb downstream 15637 true Chr04: 49252274-49267910 Glycine max
Glyma.04G221900 0.5kb downstream 0.5kb downstream 500 false Chr04: 49252274-49252773 Glycine max
Glyma.04G221900 1.0kb upstream 1.0kb upstream 16137 true Chr04: 49252774-49268910 Glycine max
Glyma.04G221900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 49267911-49268910 Glycine max
Glyma.04G221900 1.0kb downstream 1.0kb downstream 16137 true Chr04: 49251774-49267910 Glycine max
Glyma.04G221900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 49251774-49252773 Glycine max
Glyma.04G221900 2.0kb upstream 2.0kb upstream 17137 true Chr04: 49252774-49269910 Glycine max
Glyma.04G221900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 49267911-49269910 Glycine max
Glyma.04G221900 2.0kb downstream 2.0kb downstream 17137 true Chr04: 49250774-49267910 Glycine max
Glyma.04G221900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 49250774-49252773 Glycine max
Glyma.04G221900 5.0kb upstream 5.0kb upstream 20137 true Chr04: 49252774-49272910 Glycine max
Glyma.04G221900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 49267911-49272910 Glycine max
Glyma.04G221900 5.0kb downstream 5.0kb downstream 20137 true Chr04: 49247774-49267910 Glycine max
Glyma.04G221900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 49247774-49252773 Glycine max
Glyma.04G221900 10.0kb upstream 10.0kb upstream 25137 true Chr04: 49252774-49277910 Glycine max
Glyma.04G221900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 49267911-49277910 Glycine max
Glyma.04G221900 10.0kb downstream 10.0kb downstream 25137 true Chr04: 49242774-49267910 Glycine max
Glyma.04G221900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 49242774-49252773 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305027 5265 Fabidae View MSA
124060472 5270 Rosid View MSA
123737473 5271 Pentapetalae View MSA
122790694 5272 Eudicot View MSA
122043257 5273 Angiosperm View MSA
121346198 5274 Embryophyte View MSA
123425296 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.86408 0.0 15.9953   Low
cufflinks 6.93355 0.0 18.7319    
cufflinks 9.57699 0.0 25.5735    
cufflinks 8.66283 0.0 23.1968    
cufflinks 7.98006 0.0 21.4297    
cufflinks 4.78063 0.0 13.2344   Low
cufflinks 11.4688 0.0 30.5974   High
cufflinks 7.19768 0.0 19.4049    
cufflinks 8.26864 0.0 22.1705    
cufflinks 1.115        
cufflinks 1.091        
cufflinks 2.258       High
cufflinks 1.71        
cufflinks 2.143       High
cufflinks 1.81        
cufflinks 1.075        
cufflinks 1.507        
cufflinks 1.756        
cufflinks 2.028       High
cufflinks 1.001       Low
cufflinks 0.973       Low
cufflinks 1.146        
cufflinks 1.086        
cufflinks 1.074        
cufflinks 1.058        
cufflinks 1.206        

0 Strain