Gene : Glyma.04G218500 G. max Wm82.a2.v1
Defline:  (1 of 2) PF13371//PF14559 - Tetratricopeptide repeat (TPR_9) // Tetratricopeptide repeat (TPR_19) Genomic Order:  2185
Name:  ? Glyma.04G218500 Secondary Identifier:  ? PAC:30487594
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G218500 0.5kb upstream 0.5kb upstream 5024 true Chr04: 48960283-48965306 Glycine max
Glyma.04G218500 0.5kb upstream 0.5kb upstream 500 false Chr04: 48960283-48960782 Glycine max
Glyma.04G218500 0.5kb downstream 0.5kb downstream 5024 true Chr04: 48960783-48965806 Glycine max
Glyma.04G218500 0.5kb downstream 0.5kb downstream 500 false Chr04: 48965307-48965806 Glycine max
Glyma.04G218500 1.0kb upstream 1.0kb upstream 5524 true Chr04: 48959783-48965306 Glycine max
Glyma.04G218500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 48959783-48960782 Glycine max
Glyma.04G218500 1.0kb downstream 1.0kb downstream 5524 true Chr04: 48960783-48966306 Glycine max
Glyma.04G218500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 48965307-48966306 Glycine max
Glyma.04G218500 2.0kb upstream 2.0kb upstream 6524 true Chr04: 48958783-48965306 Glycine max
Glyma.04G218500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 48958783-48960782 Glycine max
Glyma.04G218500 2.0kb downstream 2.0kb downstream 6524 true Chr04: 48960783-48967306 Glycine max
Glyma.04G218500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 48965307-48967306 Glycine max
Glyma.04G218500 5.0kb upstream 5.0kb upstream 9524 true Chr04: 48955783-48965306 Glycine max
Glyma.04G218500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 48955783-48960782 Glycine max
Glyma.04G218500 5.0kb downstream 5.0kb downstream 9524 true Chr04: 48960783-48970306 Glycine max
Glyma.04G218500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 48965307-48970306 Glycine max
Glyma.04G218500 10.0kb upstream 10.0kb upstream 14524 true Chr04: 48950783-48965306 Glycine max
Glyma.04G218500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 48950783-48960782 Glycine max
Glyma.04G218500 10.0kb downstream 10.0kb downstream 14524 true Chr04: 48960783-48975306 Glycine max
Glyma.04G218500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 48965307-48975306 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303198 5265 Fabidae View MSA
124065454 5270 Rosid View MSA
123736679 5271 Pentapetalae View MSA
122790556 5272 Eudicot View MSA
122050724 5273 Angiosperm View MSA
121348352 5274 Embryophyte View MSA
123426406 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.1867 0.0 30.3523   High
cufflinks 11.0986 0.0 30.1124    
cufflinks 3.03297 0.0 9.50258   Low
cufflinks 5.98665 0.0 17.1368    
cufflinks 5.09448 0.0 14.9195    
cufflinks 3.77576 0.0 11.505   Low
cufflinks 12.2828 0.0 33.161   High
cufflinks 9.31751 0.0 25.5699    
cufflinks 5.19121 0.0 15.1438    
cufflinks 2.604        
cufflinks 0.616       Low
cufflinks 2.064        
cufflinks 1.641        
cufflinks 2.052        
cufflinks 0.595       Low
cufflinks 4.635       High
cufflinks 0.627       Low
cufflinks 2.827        
cufflinks 4.016        
cufflinks 4.62       High
cufflinks 0.722       Low
cufflinks 4.914       High
cufflinks 5.868       High
cufflinks 0.858        
cufflinks 4.609       High
cufflinks 0.675       Low

0 Strain