Gene : Glyma.04G217100 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR13516//PTHR13516:SF6 - RIBONUCLEASE P SUBUNIT P25 Genomic Order:  2171
Name:  ? Glyma.04G217100 Secondary Identifier:  ? PAC:30488227
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G217100 0.5kb upstream 0.5kb upstream 4161 true Chr04: 48812524-48816684 Glycine max
Glyma.04G217100 0.5kb upstream 0.5kb upstream 500 false Chr04: 48816185-48816684 Glycine max
Glyma.04G217100 0.5kb downstream 0.5kb downstream 4161 true Chr04: 48812024-48816184 Glycine max
Glyma.04G217100 0.5kb downstream 0.5kb downstream 500 false Chr04: 48812024-48812523 Glycine max
Glyma.04G217100 1.0kb upstream 1.0kb upstream 4661 true Chr04: 48812524-48817184 Glycine max
Glyma.04G217100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 48816185-48817184 Glycine max
Glyma.04G217100 1.0kb downstream 1.0kb downstream 4661 true Chr04: 48811524-48816184 Glycine max
Glyma.04G217100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 48811524-48812523 Glycine max
Glyma.04G217100 2.0kb upstream 2.0kb upstream 5661 true Chr04: 48812524-48818184 Glycine max
Glyma.04G217100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 48816185-48818184 Glycine max
Glyma.04G217100 2.0kb downstream 2.0kb downstream 5661 true Chr04: 48810524-48816184 Glycine max
Glyma.04G217100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 48810524-48812523 Glycine max
Glyma.04G217100 5.0kb upstream 5.0kb upstream 8661 true Chr04: 48812524-48821184 Glycine max
Glyma.04G217100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 48816185-48821184 Glycine max
Glyma.04G217100 5.0kb downstream 5.0kb downstream 8661 true Chr04: 48807524-48816184 Glycine max
Glyma.04G217100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 48807524-48812523 Glycine max
Glyma.04G217100 10.0kb upstream 10.0kb upstream 13661 true Chr04: 48812524-48826184 Glycine max
Glyma.04G217100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 48816185-48826184 Glycine max
Glyma.04G217100 10.0kb downstream 10.0kb downstream 13661 true Chr04: 48802524-48816184 Glycine max
Glyma.04G217100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 48802524-48812523 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310078 5265 Fabidae View MSA
124072183 5270 Rosid View MSA
123752020 5271 Pentapetalae View MSA
122793375 5272 Eudicot View MSA
122050157 5273 Angiosperm View MSA
121346602 5274 Embryophyte View MSA
123428727 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.2915 0.0 54.3842    
cufflinks 19.9727 0.0 53.6027    
cufflinks 12.4712 0.0 34.3117    
cufflinks 13.2859 0.0 36.4094    
cufflinks 14.6022 0.0 39.7225    
cufflinks 9.28548 0.0 26.3102   Low
cufflinks 42.0079 0.0 113.229 High High
cufflinks 11.2087 0.0 31.1432    
cufflinks 17.9018 0.0 48.2149    
cufflinks 3.202        
cufflinks 2.711       Low
cufflinks 4.104        
cufflinks 3.425        
cufflinks 4.74        
cufflinks 5.701     High  
cufflinks 6.282        
cufflinks 2.12       Low
cufflinks 3.851        
cufflinks 5.046        
cufflinks 7.943     High High
cufflinks 3.257        
cufflinks 7.422     High High
cufflinks 5.72        
cufflinks 2.66       Low
cufflinks 7.241     High High
cufflinks 2.167       Low

0 Strain