Gene : Glyma.04G213800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23076:SF49 - AAA-TYPE ATPASE FAMILY PROTEIN Genomic Order:  2138
Name:  ? Glyma.04G213800 Secondary Identifier:  ? PAC:30490250
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G213800 0.5kb upstream 0.5kb upstream 9492 true Chr04: 48546607-48556098 Glycine max
Glyma.04G213800 0.5kb upstream 0.5kb upstream 500 false Chr04: 48546607-48547106 Glycine max
Glyma.04G213800 0.5kb downstream 0.5kb downstream 9492 true Chr04: 48547107-48556598 Glycine max
Glyma.04G213800 0.5kb downstream 0.5kb downstream 500 false Chr04: 48556099-48556598 Glycine max
Glyma.04G213800 1.0kb upstream 1.0kb upstream 9992 true Chr04: 48546107-48556098 Glycine max
Glyma.04G213800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 48546107-48547106 Glycine max
Glyma.04G213800 1.0kb downstream 1.0kb downstream 9992 true Chr04: 48547107-48557098 Glycine max
Glyma.04G213800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 48556099-48557098 Glycine max
Glyma.04G213800 2.0kb upstream 2.0kb upstream 10992 true Chr04: 48545107-48556098 Glycine max
Glyma.04G213800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 48545107-48547106 Glycine max
Glyma.04G213800 2.0kb downstream 2.0kb downstream 10992 true Chr04: 48547107-48558098 Glycine max
Glyma.04G213800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 48556099-48558098 Glycine max
Glyma.04G213800 5.0kb upstream 5.0kb upstream 13992 true Chr04: 48542107-48556098 Glycine max
Glyma.04G213800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 48542107-48547106 Glycine max
Glyma.04G213800 5.0kb downstream 5.0kb downstream 13992 true Chr04: 48547107-48561098 Glycine max
Glyma.04G213800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 48556099-48561098 Glycine max
Glyma.04G213800 10.0kb upstream 10.0kb upstream 18992 true Chr04: 48537107-48556098 Glycine max
Glyma.04G213800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 48537107-48547106 Glycine max
Glyma.04G213800 10.0kb downstream 10.0kb downstream 18992 true Chr04: 48547107-48566098 Glycine max
Glyma.04G213800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 48556099-48566098 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302710 5265 Fabidae View MSA
124066007 5270 Rosid View MSA
123738416 5271 Pentapetalae View MSA
122790727 5272 Eudicot View MSA
122043853 5273 Angiosperm View MSA
121345104 5274 Embryophyte View MSA
123380156 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.83256 0.0 9.57695   High
cufflinks 2.78343 0.0 11.0296   High
cufflinks 1.3323 0.0 5.5882   Low
cufflinks 2.07633 0.0 8.98009    
cufflinks 2.40528 0.0 8.52089    
cufflinks 1.03349 0.0 4.79644   Low
cufflinks 1.98503 0.0 7.44111    
cufflinks 1.89466 0.0 7.15523    
cufflinks 2.32109 0.0 8.27114    
cufflinks 0.376        
cufflinks 0.081       Low
cufflinks 0.712        
cufflinks 0.623        
cufflinks 0.731        
cufflinks 0.125       Low
cufflinks 1.109       High
cufflinks 0.194        
cufflinks 0.781        
cufflinks 1.01        
cufflinks 0.686        
cufflinks 0.118       Low
cufflinks 0.89        
cufflinks 1.325       High
cufflinks 0.076       Low
cufflinks 0.918        
cufflinks 0.176        

0 Strain