Gene : Glyma.04G222600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33644:SF3 - U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED Genomic Order:  2226
Name:  ? Glyma.04G222600 Secondary Identifier:  ? PAC:30488135
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G222600 0.5kb upstream 0.5kb upstream 5924 true Chr04: 49314436-49320359 Glycine max
Glyma.04G222600 0.5kb upstream 0.5kb upstream 500 false Chr04: 49319860-49320359 Glycine max
Glyma.04G222600 0.5kb downstream 0.5kb downstream 5924 true Chr04: 49313936-49319859 Glycine max
Glyma.04G222600 0.5kb downstream 0.5kb downstream 500 false Chr04: 49313936-49314435 Glycine max
Glyma.04G222600 1.0kb upstream 1.0kb upstream 6424 true Chr04: 49314436-49320859 Glycine max
Glyma.04G222600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 49319860-49320859 Glycine max
Glyma.04G222600 1.0kb downstream 1.0kb downstream 6424 true Chr04: 49313436-49319859 Glycine max
Glyma.04G222600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 49313436-49314435 Glycine max
Glyma.04G222600 2.0kb upstream 2.0kb upstream 7424 true Chr04: 49314436-49321859 Glycine max
Glyma.04G222600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 49319860-49321859 Glycine max
Glyma.04G222600 2.0kb downstream 2.0kb downstream 7424 true Chr04: 49312436-49319859 Glycine max
Glyma.04G222600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 49312436-49314435 Glycine max
Glyma.04G222600 5.0kb upstream 5.0kb upstream 10424 true Chr04: 49314436-49324859 Glycine max
Glyma.04G222600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 49319860-49324859 Glycine max
Glyma.04G222600 5.0kb downstream 5.0kb downstream 10424 true Chr04: 49309436-49319859 Glycine max
Glyma.04G222600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 49309436-49314435 Glycine max
Glyma.04G222600 10.0kb upstream 10.0kb upstream 15424 true Chr04: 49314436-49329859 Glycine max
Glyma.04G222600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 49319860-49329859 Glycine max
Glyma.04G222600 10.0kb downstream 10.0kb downstream 15424 true Chr04: 49304436-49319859 Glycine max
Glyma.04G222600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 49304436-49314435 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308467 5265 Fabidae View MSA
124067678 5270 Rosid View MSA
123739298 5271 Pentapetalae View MSA
122793350 5272 Eudicot View MSA
122045751 5273 Angiosperm View MSA
121348831 5274 Embryophyte View MSA
123381033 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.89882 0.0 25.7117    
cufflinks 5.37202 0.0 21.431    
cufflinks 7.66504 0.0 28.2346   High
cufflinks 6.34751 0.0 24.2128    
cufflinks 4.9268 0.0 17.0625   Low
cufflinks 4.39442 0.0 15.8812   Low
cufflinks 6.78339 0.0 25.4007    
cufflinks 5.98536 0.0 23.1255    
cufflinks 5.4423 0.0 18.5471    
cufflinks 0.605       Low
cufflinks 1.904       High
cufflinks 1.023        
cufflinks 0.688       Low
cufflinks 0.636       Low
cufflinks 1.761       High
cufflinks 1.277        
cufflinks 0.642       Low
cufflinks 0.929        
cufflinks 0.93        
cufflinks 1.839       High
cufflinks 1.588        
cufflinks 1.403        
cufflinks 0.857        
cufflinks 1.71       High
cufflinks 1.536        
cufflinks 0.974        

0 Strain