Gene : Glyma.04G223000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR26402:SF521 - TWO-COMPONENT RESPONSE REGULATOR ARR16-RELATED Genomic Order:  2230
Name:  ? Glyma.04G223000 Secondary Identifier:  ? PAC:30489721
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G223000 0.5kb upstream 0.5kb upstream 2853 true Chr04: 49360387-49363239 Glycine max
Glyma.04G223000 0.5kb upstream 0.5kb upstream 500 false Chr04: 49360387-49360886 Glycine max
Glyma.04G223000 0.5kb downstream 0.5kb downstream 2853 true Chr04: 49360887-49363739 Glycine max
Glyma.04G223000 0.5kb downstream 0.5kb downstream 500 false Chr04: 49363240-49363739 Glycine max
Glyma.04G223000 1.0kb upstream 1.0kb upstream 3353 true Chr04: 49359887-49363239 Glycine max
Glyma.04G223000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 49359887-49360886 Glycine max
Glyma.04G223000 1.0kb downstream 1.0kb downstream 3353 true Chr04: 49360887-49364239 Glycine max
Glyma.04G223000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 49363240-49364239 Glycine max
Glyma.04G223000 2.0kb upstream 2.0kb upstream 4353 true Chr04: 49358887-49363239 Glycine max
Glyma.04G223000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 49358887-49360886 Glycine max
Glyma.04G223000 2.0kb downstream 2.0kb downstream 4353 true Chr04: 49360887-49365239 Glycine max
Glyma.04G223000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 49363240-49365239 Glycine max
Glyma.04G223000 5.0kb upstream 5.0kb upstream 7353 true Chr04: 49355887-49363239 Glycine max
Glyma.04G223000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 49355887-49360886 Glycine max
Glyma.04G223000 5.0kb downstream 5.0kb downstream 7353 true Chr04: 49360887-49368239 Glycine max
Glyma.04G223000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 49363240-49368239 Glycine max
Glyma.04G223000 10.0kb upstream 10.0kb upstream 12353 true Chr04: 49350887-49363239 Glycine max
Glyma.04G223000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 49350887-49360886 Glycine max
Glyma.04G223000 10.0kb downstream 10.0kb downstream 12353 true Chr04: 49360887-49373239 Glycine max
Glyma.04G223000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 49363240-49373239 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308348 5265 Fabidae View MSA
124062080 5270 Rosid View MSA
123748366 5271 Pentapetalae View MSA
122792334 5272 Eudicot View MSA
122050729 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349796 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.02375 0.0 15.5119    
cufflinks 8.44867 0.0 26.4623   High
cufflinks 1.83733 0.0 7.40242    
cufflinks 0.0569503 0.0 0.6691 Low Low
cufflinks 0.519084 0.0 2.49496    
cufflinks 7.02078 0.0 21.1881   High
cufflinks 0.144066 0.0 1.7472 Low  
cufflinks 0.0816206 0.0 1.02691 Low Low
cufflinks 0.074     Low  
cufflinks 0.007     Low Low
cufflinks 2.714        
cufflinks 0.041     Low  
cufflinks 0.015     Low Low
cufflinks 0.04     Low  
cufflinks 3.601        
cufflinks 0.024     Low  
cufflinks 1.004        
cufflinks 4.676       High
cufflinks 3.027        
cufflinks 0.028     Low  
cufflinks 4.053       High
cufflinks 5.145       High
cufflinks 0.009     Low Low
cufflinks 4.155       High
cufflinks 0.0     Not Expressed Not Expressed

0 Strain