Gene : Glyma.04G247600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11014:SF62 - IAA-AMINO ACID HYDROLASE ILR1-LIKE 6 Genomic Order:  2476
Name:  ? Glyma.04G247600 Secondary Identifier:  ? PAC:30487245
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G247600 0.5kb upstream 0.5kb upstream 8662 true Chr04: 51479659-51488320 Glycine max
Glyma.04G247600 0.5kb upstream 0.5kb upstream 500 false Chr04: 51479659-51480158 Glycine max
Glyma.04G247600 0.5kb downstream 0.5kb downstream 8662 true Chr04: 51480159-51488820 Glycine max
Glyma.04G247600 0.5kb downstream 0.5kb downstream 500 false Chr04: 51488321-51488820 Glycine max
Glyma.04G247600 1.0kb upstream 1.0kb upstream 9162 true Chr04: 51479159-51488320 Glycine max
Glyma.04G247600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 51479159-51480158 Glycine max
Glyma.04G247600 1.0kb downstream 1.0kb downstream 9162 true Chr04: 51480159-51489320 Glycine max
Glyma.04G247600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 51488321-51489320 Glycine max
Glyma.04G247600 2.0kb upstream 2.0kb upstream 10162 true Chr04: 51478159-51488320 Glycine max
Glyma.04G247600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 51478159-51480158 Glycine max
Glyma.04G247600 2.0kb downstream 2.0kb downstream 10162 true Chr04: 51480159-51490320 Glycine max
Glyma.04G247600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 51488321-51490320 Glycine max
Glyma.04G247600 5.0kb upstream 5.0kb upstream 13162 true Chr04: 51475159-51488320 Glycine max
Glyma.04G247600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 51475159-51480158 Glycine max
Glyma.04G247600 5.0kb downstream 5.0kb downstream 13162 true Chr04: 51480159-51493320 Glycine max
Glyma.04G247600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 51488321-51493320 Glycine max
Glyma.04G247600 10.0kb upstream 10.0kb upstream 18162 true Chr04: 51470159-51488320 Glycine max
Glyma.04G247600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 51470159-51480158 Glycine max
Glyma.04G247600 10.0kb downstream 10.0kb downstream 18162 true Chr04: 51480159-51498320 Glycine max
Glyma.04G247600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 51488321-51498320 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305115 5265 Fabidae View MSA
124061387 5270 Rosid View MSA
123745487 5271 Pentapetalae View MSA
122795050 5272 Eudicot View MSA
122047186 5273 Angiosperm View MSA
121350602 5274 Embryophyte View MSA
123427442 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.37534 0.0 10.1813    
cufflinks 0.53444 0.0 1.96153   Low
cufflinks 3.06558 0.0 9.41722    
cufflinks 1.56996 0.0 5.27713    
cufflinks 4.6695 0.0 13.4585    
cufflinks 5.24684 0.0 14.9387    
cufflinks 5.49951 0.0 15.599    
cufflinks 1.53083 0.0 5.16323    
cufflinks 3.0232 0.0 9.26695    
cufflinks 0.92        
cufflinks 0.768        
cufflinks 0.863        
cufflinks 0.851        
cufflinks 0.561        
cufflinks 0.356       Low
cufflinks 0.443        
cufflinks 6.505     High High
cufflinks 1.911        
cufflinks 0.599        
cufflinks 0.598        
cufflinks 0.905        
cufflinks 0.534        
cufflinks 0.675        
cufflinks 1.325        
cufflinks 0.423        
cufflinks 4.092       High

0 Strain