Gene : Glyma.04G237200 G. max Wm82.a2.v1
Defline:  (1 of 2) PF03291 - mRNA capping enzyme (Pox_MCEL) Genomic Order:  2372
Name:  ? Glyma.04G237200 Secondary Identifier:  ? PAC:30488193
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G237200 0.5kb upstream 0.5kb upstream 6581 true Chr04: 50576216-50582796 Glycine max
Glyma.04G237200 0.5kb upstream 0.5kb upstream 500 false Chr04: 50582297-50582796 Glycine max
Glyma.04G237200 0.5kb downstream 0.5kb downstream 6581 true Chr04: 50575716-50582296 Glycine max
Glyma.04G237200 0.5kb downstream 0.5kb downstream 500 false Chr04: 50575716-50576215 Glycine max
Glyma.04G237200 1.0kb upstream 1.0kb upstream 7081 true Chr04: 50576216-50583296 Glycine max
Glyma.04G237200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 50582297-50583296 Glycine max
Glyma.04G237200 1.0kb downstream 1.0kb downstream 7081 true Chr04: 50575216-50582296 Glycine max
Glyma.04G237200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 50575216-50576215 Glycine max
Glyma.04G237200 2.0kb upstream 2.0kb upstream 8081 true Chr04: 50576216-50584296 Glycine max
Glyma.04G237200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 50582297-50584296 Glycine max
Glyma.04G237200 2.0kb downstream 2.0kb downstream 8081 true Chr04: 50574216-50582296 Glycine max
Glyma.04G237200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 50574216-50576215 Glycine max
Glyma.04G237200 5.0kb upstream 5.0kb upstream 11081 true Chr04: 50576216-50587296 Glycine max
Glyma.04G237200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 50582297-50587296 Glycine max
Glyma.04G237200 5.0kb downstream 5.0kb downstream 11081 true Chr04: 50571216-50582296 Glycine max
Glyma.04G237200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 50571216-50576215 Glycine max
Glyma.04G237200 10.0kb upstream 10.0kb upstream 16081 true Chr04: 50576216-50592296 Glycine max
Glyma.04G237200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 50582297-50592296 Glycine max
Glyma.04G237200 10.0kb downstream 10.0kb downstream 16081 true Chr04: 50566216-50582296 Glycine max
Glyma.04G237200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 50566216-50576215 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041055 5273 Angiosperm View MSA
122308772 5265 Fabidae View MSA
124067798 5270 Rosid View MSA
123738842 5271 Pentapetalae View MSA
122793287 5272 Eudicot View MSA
121348778 5274 Embryophyte View MSA
123428419 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.13569 0.0 12.6949    
cufflinks 4.6495 0.0 21.4144   High
cufflinks 1.59426 0.0 10.8755   Low
cufflinks 2.81753 0.0 15.5517    
cufflinks 2.53239 0.0 14.6668    
cufflinks 3.49339 0.0 14.7392    
cufflinks 2.88522 0.0 13.1606    
cufflinks 2.78227 0.0 15.0484    
cufflinks 2.87152 0.0 15.701    
cufflinks 0.218        
cufflinks 0.077       Low
cufflinks 0.276        
cufflinks 0.235        
cufflinks 0.256        
cufflinks 0.163        
cufflinks 0.287        
cufflinks 0.087       Low
cufflinks 0.415       High
cufflinks 0.494       High
cufflinks 0.311        
cufflinks 0.125        
cufflinks 0.326        
cufflinks 0.406       High
cufflinks 0.113       Low
cufflinks 0.316        
cufflinks 0.092       Low

0 Strain