Gene : Glyma.04G000100 G. max Wm82.a2.v1
Defline:  (1 of 10) PTHR22731//PTHR22731:SF9 - RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1 Genomic Order:  1
Name:  ? Glyma.04G000100 Secondary Identifier:  ? PAC:30488689
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Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G000100 0.5kb upstream 0.5kb upstream 15282 true Chr04: 119-15400 Glycine max
Glyma.04G000100 0.5kb upstream 0.5kb upstream 500 false Chr04: 14901-15400 Glycine max
Glyma.04G000100 0.5kb downstream 0.5kb downstream 14900 true Chr04: 1-14900 Glycine max
Glyma.04G000100 0.5kb downstream 0.5kb downstream 118 false Chr04: 1-118 Glycine max
Glyma.04G000100 1.0kb upstream 1.0kb upstream 15782 true Chr04: 119-15900 Glycine max
Glyma.04G000100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 14901-15900 Glycine max
Glyma.04G000100 1.0kb downstream 1.0kb downstream 14900 true Chr04: 1-14900 Glycine max
Glyma.04G000100 1.0kb downstream 1.0kb downstream 118 false Chr04: 1-118 Glycine max
Glyma.04G000100 2.0kb upstream 2.0kb upstream 16782 true Chr04: 119-16900 Glycine max
Glyma.04G000100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 14901-16900 Glycine max
Glyma.04G000100 2.0kb downstream 2.0kb downstream 14900 true Chr04: 1-14900 Glycine max
Glyma.04G000100 2.0kb downstream 2.0kb downstream 118 false Chr04: 1-118 Glycine max
Glyma.04G000100 5.0kb upstream 5.0kb upstream 19782 true Chr04: 119-19900 Glycine max
Glyma.04G000100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 14901-19900 Glycine max
Glyma.04G000100 5.0kb downstream 5.0kb downstream 14900 true Chr04: 1-14900 Glycine max
Glyma.04G000100 5.0kb downstream 5.0kb downstream 118 false Chr04: 1-118 Glycine max
Glyma.04G000100 10.0kb upstream 10.0kb upstream 24782 true Chr04: 119-24900 Glycine max
Glyma.04G000100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 14901-24900 Glycine max
Glyma.04G000100 10.0kb downstream 10.0kb downstream 14900 true Chr04: 1-14900 Glycine max
Glyma.04G000100 10.0kb downstream 10.0kb downstream 118 false Chr04: 1-118 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121615379 5273 Angiosperm View MSA
122250252 5265 Fabidae View MSA
123993516 5270 Rosid View MSA
123568283 5271 Pentapetalae View MSA
122603029 5272 Eudicot View MSA
120887573 5274 Embryophyte View MSA
122928327 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.28079 0.0 6.51053   High
cufflinks 1.67904 0.0 4.97558    
cufflinks 0.927167 0.0 2.97515   Low
cufflinks 1.46244 0.0 4.41384    
cufflinks 1.41993 0.0 4.32051    
cufflinks 0.831232 0.0 2.71996   Low
cufflinks 1.43125 0.0 4.35399    
cufflinks 0.973657 0.0 3.11385    
cufflinks 1.17806 0.0 3.67035    
cufflinks 0.299        
cufflinks 0.141       Low
cufflinks 0.6       High
cufflinks 0.218        
cufflinks 0.318        
cufflinks 0.315        
cufflinks 0.283        
cufflinks 0.142       Low
cufflinks 0.675       High
cufflinks 0.542       High
cufflinks 0.238        
cufflinks 0.229        
cufflinks 0.302        
cufflinks 0.603       High
cufflinks 0.139       Low
cufflinks 0.322        
cufflinks 0.236        

0 Strain