Gene : Glyma.04G202300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR17130//PTHR17130:SF25 - MITOCHONDRIAL OUTER MEMBRANE PROTEIN 25 Genomic Order:  2023
Name:  ? Glyma.04G202300 Secondary Identifier:  ? PAC:30488142
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G202300 0.5kb upstream 0.5kb upstream 2184 true Chr04: 47511262-47513445 Glycine max
Glyma.04G202300 0.5kb upstream 0.5kb upstream 500 false Chr04: 47511262-47511761 Glycine max
Glyma.04G202300 0.5kb downstream 0.5kb downstream 2184 true Chr04: 47511762-47513945 Glycine max
Glyma.04G202300 0.5kb downstream 0.5kb downstream 500 false Chr04: 47513446-47513945 Glycine max
Glyma.04G202300 1.0kb upstream 1.0kb upstream 2684 true Chr04: 47510762-47513445 Glycine max
Glyma.04G202300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 47510762-47511761 Glycine max
Glyma.04G202300 1.0kb downstream 1.0kb downstream 2684 true Chr04: 47511762-47514445 Glycine max
Glyma.04G202300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 47513446-47514445 Glycine max
Glyma.04G202300 2.0kb upstream 2.0kb upstream 3684 true Chr04: 47509762-47513445 Glycine max
Glyma.04G202300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 47509762-47511761 Glycine max
Glyma.04G202300 2.0kb downstream 2.0kb downstream 3684 true Chr04: 47511762-47515445 Glycine max
Glyma.04G202300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 47513446-47515445 Glycine max
Glyma.04G202300 5.0kb upstream 5.0kb upstream 6684 true Chr04: 47506762-47513445 Glycine max
Glyma.04G202300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 47506762-47511761 Glycine max
Glyma.04G202300 5.0kb downstream 5.0kb downstream 6684 true Chr04: 47511762-47518445 Glycine max
Glyma.04G202300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 47513446-47518445 Glycine max
Glyma.04G202300 10.0kb upstream 10.0kb upstream 11684 true Chr04: 47501762-47513445 Glycine max
Glyma.04G202300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 47501762-47511761 Glycine max
Glyma.04G202300 10.0kb downstream 10.0kb downstream 11684 true Chr04: 47511762-47523445 Glycine max
Glyma.04G202300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 47513446-47523445 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309170 5265 Fabidae View MSA
124067897 5270 Rosid View MSA
123746981 5271 Pentapetalae View MSA
122786160 5272 Eudicot View MSA
122045376 5273 Angiosperm View MSA
121346766 5274 Embryophyte View MSA
123425626 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.7085 0.0 97.9634 High High
cufflinks 3.5943 0.0 12.1145    
cufflinks 3.37269 0.0 11.4361    
cufflinks 2.10092 0.0 7.43937    
cufflinks 3.84275 0.0 12.8169    
cufflinks 1.89244 0.0 6.76231    
cufflinks 3.64918 0.0 12.2431    
cufflinks 1.54471 0.0 5.59085    
cufflinks 2.79814 0.0 9.67536    
cufflinks 0.603        
cufflinks 0.078       Low
cufflinks 0.918        
cufflinks 2.824        
cufflinks 1.306        
cufflinks 0.045     Low Low
cufflinks 4.635       High
cufflinks 0.13        
cufflinks 1.616        
cufflinks 0.589        
cufflinks 1.099        
cufflinks 0.06     Low Low
cufflinks 2.13        
cufflinks 8.18     High High
cufflinks 0.09       Low
cufflinks 2.376        
cufflinks 0.211        

0 Strain