Gene : Glyma.04G200600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31384:SF8 - AUXIN RESPONSE FACTOR 2 Genomic Order:  2006
Name:  ? Glyma.04G200600 Secondary Identifier:  ? PAC:30489580
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G200600 0.5kb upstream 0.5kb upstream 5508 true Chr04: 47316151-47321658 Glycine max
Glyma.04G200600 0.5kb upstream 0.5kb upstream 500 false Chr04: 47321159-47321658 Glycine max
Glyma.04G200600 0.5kb downstream 0.5kb downstream 5508 true Chr04: 47315651-47321158 Glycine max
Glyma.04G200600 0.5kb downstream 0.5kb downstream 500 false Chr04: 47315651-47316150 Glycine max
Glyma.04G200600 1.0kb upstream 1.0kb upstream 6008 true Chr04: 47316151-47322158 Glycine max
Glyma.04G200600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 47321159-47322158 Glycine max
Glyma.04G200600 1.0kb downstream 1.0kb downstream 6008 true Chr04: 47315151-47321158 Glycine max
Glyma.04G200600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 47315151-47316150 Glycine max
Glyma.04G200600 2.0kb upstream 2.0kb upstream 7008 true Chr04: 47316151-47323158 Glycine max
Glyma.04G200600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 47321159-47323158 Glycine max
Glyma.04G200600 2.0kb downstream 2.0kb downstream 7008 true Chr04: 47314151-47321158 Glycine max
Glyma.04G200600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 47314151-47316150 Glycine max
Glyma.04G200600 5.0kb upstream 5.0kb upstream 10008 true Chr04: 47316151-47326158 Glycine max
Glyma.04G200600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 47321159-47326158 Glycine max
Glyma.04G200600 5.0kb downstream 5.0kb downstream 10008 true Chr04: 47311151-47321158 Glycine max
Glyma.04G200600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 47311151-47316150 Glycine max
Glyma.04G200600 10.0kb upstream 10.0kb upstream 15008 true Chr04: 47316151-47331158 Glycine max
Glyma.04G200600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 47321159-47331158 Glycine max
Glyma.04G200600 10.0kb downstream 10.0kb downstream 15008 true Chr04: 47306151-47321158 Glycine max
Glyma.04G200600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 47306151-47316150 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254865 5265 Fabidae View MSA
124074204 5270 Rosid View MSA
123738265 5271 Pentapetalae View MSA
122792462 5272 Eudicot View MSA
122051461 5273 Angiosperm View MSA
121348224 5274 Embryophyte View MSA
123380779 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.1852 0.0 113.064 High  
cufflinks 30.4601 0.0 108.646 High  
cufflinks 51.1486 0.0 170.854 High High
cufflinks 31.3926 0.0 143.438 High  
cufflinks 22.0583 0.0 72.9082 High  
cufflinks 18.4741 0.0 58.9149   Low
cufflinks 25.3653 0.0 86.1849 High  
cufflinks 25.783 0.0 88.1309 High  
cufflinks 16.5711 0.0 51.9193   Low
cufflinks 15.662     High  
cufflinks 15.082     High  
cufflinks 17.383     High  
cufflinks 4.471       Low
cufflinks 2.295       Low
cufflinks 26.33     High  
cufflinks 14.688     High  
cufflinks 59.527     High High
cufflinks 14.036     High  
cufflinks 18.018     High  
cufflinks 15.921     High  
cufflinks 11.66     High  
cufflinks 15.208     High  
cufflinks 20.674     High  
cufflinks 14.237     High  
cufflinks 15.42     High  
cufflinks 37.138     High High

0 Strain